KEGG   Chaetura pelagica (chimney swift): 104394156
Entry
104394156         CDS       T08631                                 
Symbol
SMEK1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X1
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpea01009]
    104394156 (SMEK1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpea03400]
    104394156 (SMEK1)
Protein phosphatases and associated proteins [BR:cpea01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     104394156 (SMEK1)
DNA repair and recombination proteins [BR:cpea03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     104394156 (SMEK1)
SSDB
Motif
Pfam: PP4R3 WH1 Ran_BP1 Collagen TMEM164
Other DBs
NCBI-GeneID: 104394156
NCBI-ProteinID: XP_010002014
LinkDB
Position
Unknown
AA seq 821 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSCYVERLKGMSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDLVDESEEE
RFDDMSSPGLELPSCELSRLEEIAELVASSLPSPLRREKLALALENEGYIKKLLEIFHVC
EDLENTEGLHHLYEIIKGIFLLNRTALFEVMFSEECIMDVIGCLEYDPSLSQSRKHREFL
TKTAKFKEVIPISDPELKQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQEDEKFLTDLFAQLTDEATDEEKRQELVNFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDAQVRSAATDIFSYLVEYNPSMVREFVMQEAQQNDDDILLINLIIEH
MICDTDPELGGAVLLMGLLRTLVDPENMLATANKTEKTEFLGFFYKHCMHVLTAPLLANT
TEDKPSKDDFQTAQLLALILELLTFCVEHHTYHIKNYIINKDILRRVLVLMASKHAFLAL
CALRFKRKIIGLKDEFYNRYIMKSFLFEPVVKAFLNNGSRYNLMNSAIIEMFEFIRVEDI
KSLTTHVIENYWKALEDVDYVQTFKGLKLRFEQQRERQDNPKLDSMRSILRNHRYRRDAR
TLEDEEEMWFNTDEDDMEDGEAVVPPSDKTKNDEDIMDPISKFMERKKLKESEEKEVLLK
TNLSGRQSPSFKLSFSSGTKSNLTSQSSASNLPGSPGSPGSPGSPGSPGSVSKSTSQMAA
ITTKGGLVGLVDYPDDDEEDDEDEDKEETLPLSKKAKLESS
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgactgacacccggcggagggtgaaggtttacacgctaaacgaggaccgccagtgggat
gatcgaggcacagggcatgtgtcctcttgctacgtggagagactgaagggcatgtccctg
ctagtcagggcagagagtgatggctctcttcttttggagtccaaaattaacccaaacact
gcataccagaagcaacaggataccttgattgtgtggtctgaagctgaaaattatgatttg
gcacttagctttcaagaaaaagcaggatgtgatgaaatatgggaaaaaatatgtcaggtt
caaggcaaagacccttctgttgatattactcaggaccttgttgatgaatctgaggaagaa
cgttttgatgatatgtcatcaccaggtctagaattgccatcttgtgaattaagtcgacta
gaagaaattgcagaacttgtggcatcttcactgccctcaccgttacgtcgtgaaaaactc
gcactagcactagaaaatgagggctatattaagaagctcttagaaatttttcatgtgtgt
gaagacttggagaacactgaaggactacaccacttatatgaaattatcaagggaattttc
cttttgaacagaactgcactttttgaagtcatgttttccgaggaatgtataatggacgta
attggatgcctagaatatgatccgtctttatcacagtcacggaaacacagggaatttctg
actaaaacagcaaaatttaaagaggtgattcctatatctgatccagagctgaagcaaaaa
atacatcagacatacagagtacagtatattcaagatatggtcctacccactccctcagtt
tttgaggaaaatatgctatcaacacttcattctttcatcttttttaataaagtggaaata
gttggtatgttacaggaggatgaaaaatttctgacagacttgtttgcccaactaacagat
gaagccacagatgaggagaaaagacaggaattggtaaattttcttaaagaattttgtgcg
ttctctcaaacactgcagcctcaaaatagagatgcatttttcaaaaccttgtcaaatatg
ggcatactaccagcactagaagtcatactgggtatggatgatgcacaagtacgaagtgca
gccactgatatattctcatatttggttgaatacaacccatccatggtacgagagtttgtc
atgcaggaagcacagcagaatgatgatgatatattactcattaacctcattatagaacac
atgatttgtgacacagatccagaacttggaggggcagttctacttatgggtttgcttcgt
actttagttgatccagaaaatatgcttgccactgccaataaaacggaaaagactgagttc
ttgggtttcttctacaaacactgcatgcatgttctgacagcccctttgttggccaatact
accgaggacaagcctagcaaagatgattttcagacagcccaactcttggcattgatattg
gagttgctgactttctgtgtagaacatcacacttaccacataaagaactacatcattaac
aaagatatcctgcgaagggtactcgttctcatggcctcaaagcatgctttcttggcattg
tgtgcccttcgtttcaagagaaagataattggactaaaggatgaattctacaaccgttac
ataatgaaaagttttttgtttgaacctgtggtcaaagcatttctaaataatggttcccgt
tataatctgatgaactctgccataatagagatgtttgaatttatcagagtggaagatata
aaatcattaacaactcatgtaattgaaaattactggaaagcactggaagatgtagattat
gtgcagacatttaaaggactgaaactacgatttgagcaacaaagggaaagacaagataat
ccaaaacttgacagcatgcgctccattctgagaaaccacagatacagaagggatgcgaga
accctggaggatgaggaagaaatgtggtttaatactgatgaagatgatatggaagatgga
gaggcagtggtgcccccttctgacaaaactaaaaatgatgaagatattatggaccctatc
agtaaattcatggaaaggaaaaaattaaaagagagtgaagaaaaagaagttcttctgaaa
actaacctttcagggcgtcaaagccccagtttcaagctttccttctccagtggtacaaaa
tctaaccttaccagccagtcctctgcaagtaatctgcctgggtccccagggtctcctgga
tccccagggtcccctgggtctccaggatcagtttctaaaagcacatctcagatggcagct
attacaactaagggaggcctcgttgggcttgtagattatcctgatgatgatgaagaggat
gatgaagatgaagataaagaggaaactttacctttgtcaaagaaagcaaagcttgagtca
tcataa

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