Chaetura pelagica (chimney swift): 104394295
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Entry
104394295 CDS
T08631
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104394295 (PRDM1)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104394295 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2HE
STL11_N
Motif
Other DBs
NCBI-GeneID:
104394295
NCBI-ProteinID:
XP_010002167
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MKMDMEDADMTLWTEADFEEKCTYIVNDHPLDPSADGSTLTQAEASLPRNLTFKYASNCK
EVTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKS
NWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSGDL
AMMNLTQTHVNPKQHSADKDELYQKSIPKKEHSVKEILKMESNPPKGKDFFPTNISPVTP
EKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYGMDRPSYITHSPIQTSTTPS
PSGRSSPDPSLKSSSPHSSPGVTVSPLAPTSQEHRESYSYLNGSYGSEGLGSYPGYAPPG
HLPPAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPVYGNLLSGGSL
SHHVLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGS
PTAGTAARAEHIMQPKPTSVVLAATGGGEGMNLIKSKRNVTGYKTLPYPLKKQNGKIKYE
CNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQPY
SRGWSAIFKLKSPTNLKPPLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCI
HCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNID
LTSIVEKDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSMMKLPHGHPLPL
LPVKVKQETVEPMDP
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggatgctgacatgactctgtggacagaagctgattttgaagag
aagtgcacgtacattgtaaacgatcacccgttggatcccagtgctgatggaagcacccta
actcaggcagaggcttccttgccaaggaacttgactttcaaatacgcatctaactgcaaa
gaggtcactggagttataagcaaagagtacatcccgaaaggaacgcgcttcggacccctg
gtaggagagatttataccagcgatacggttcccaagaatgcaaacagaaaatacttttgg
cggatctattccagtggtgagcttcaccacttcattgatggatttaatgaggacaagagc
aactggatgcgttatgtaaaccctggctactctgttcaggaacagaacttggctgcttgt
cagaatggaatgaacatctacttctacaccatcaagcccatccctgccaaccaagagctg
cttgtgtggtattgccgagactttgcagagaggctgcactatccctcctctggagacctg
gcaatgatgaacctcacacaaacccacgttaatccaaagcagcacagtgctgataaagat
gaactctatcagaaaagcattccaaagaaggagcacagtgtgaaagaaatcctgaaaatg
gaatccaatcctccaaaaggaaaagacttcttcccgaccaacatttcaccggttactcca
gaaaaagacttggatgatttgcgtaagaactacagccctgagaggtgtttcttccctcga
gttgtgtaccctatccgacctcacattccagaagactatctgaaagcttccctggcatat
gggatggacagacccagctacattactcactcacccatccagacgtctactactccaagt
ccttccgggaggagcagcccagacccaagtttaaaaagttcaagccctcacagcagtcca
ggggtgacggtttcgcctctggcacctacttcccaagagcacagagagtcatactcttac
ttgaacggatcgtatggctcagaaggattggggtcctaccctggatacgcaccccctggc
cacctcccccctgcctttctaccatcctacaacccccactaccccaaattcctgttacct
ccgttcaacatgagctgcaataacctgagtgctttgaacaatatcaacggcatcaacaat
ttcaatctcttcccacggatgtaccctgtttatggcaacctgctcagcgggggcagcctt
tcccaccacgtgctgaaccccaccacgctccccagctccttgcccagcgaaggaggccgc
cggttgctgcagccagatcatccgagagacttcctcatcccagcccctaacagtgccttc
tccatcacgggcgctgctgccagcatgaaggacaagccatgcagccccaccagcgggtca
cccacggctgggacagccgcccgtgcagaacacataatgcaacctaaacctacctcagtg
gtgttggctgccaccggcgggggagaaggcatgaatctcatcaaaagcaagaggaacgtg
accggttacaaaaccctcccgtacccactgaagaagcagaacgggaagatcaagtacgaa
tgcaacgtttgttccaagacctttggccagctctccaatctgaaggtgcacctccgagta
cacagcggagagagaccatttaaatgccagacttgcaataaaggcttcacgcagctggct
cacctccagaagcactatctggtacacacgggagagaaaccccacgagtgtcagccctac
tcgagaggctggtcagcaatatttaagttaaaaagccccaccaacctcaaaccccccctg
cggctccactctggagagaagccttaccagtgcaagctctgccccgccaaattcacccag
tttgtgcacctgaagctgcacaagcgtctccacacccgggaacgtccccataaatgcatc
cactgccacaagagctacattcacctctgcagcctccaggtccacctgaaggggaactgc
cccgtcgcccctgcctccggcctctccatggaggacctgaatcgaatcaacgaggagatc
gagaagttcgacatcagcgacaacgccgacaagctggaagaagtggaggacaatatcgac
ttgacgtccatcgtggagaaggatatactgaccatgctcaggagggagatggaaggagct
aatctgaaagtgtccctgcagaggaacctgggaaacggacttatctcctcaggatgcaac
ctttatgagtcgtcagacatgtccatgatgaagttgcctcacggtcacccactacctctg
ttacctgtaaaggtcaagcaagaaacagttgaaccaatggacccttaa
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