Chaetura pelagica (chimney swift): 104394444
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Entry
104394444 CDS
T08631
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104394444 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104394444 (PRPF38A)
Spliceosome [BR:
cpea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104394444 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
104394444 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104394444
NCBI-ProteinID:
XP_010002340
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
GNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYLEP
LYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPRVS
ALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPAVRYRRSRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERSKK
SHKKSRRGNE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gggaacatcaagcccacgcccttcttgtgcctgacgctgaagatgctgcagatccagccg
gagaaggacatcatcgtggagttcatcaagaacgaggacttcaagtatgtccgaatgctt
ggtgcgttgtacatgagactgacaggcacggccattgactgctacaagtatcttgaacca
ctctacaatgactacagaaaaataaaaagtcagaacagaaatggggaatttgaactgatg
cacgtggatgaatttattgatgaactcctccatgaggaacgtgtatgcgatatcatcctg
cctcgattacagaaacgatatgtcttggaagaagctgagcaacttgagcctcgtgtcagt
gctctggaagaagacatggatgatgtagaatctagtgaggaggaggaggaagaggatgaa
aagctggagcgagcaccctcccctgaccaccgcagaagaggctacagggacctggacaaa
cctcgcagatccccagctgtgcggtacaggcgcagccgaagcaggtctccgagaagacga
agccgctctcccaaaagaagaagcccatccccacggcgggagaggcatcgcagcaaaagc
ccaagacggcaccggagcagatccagggagaggcgccacagatcgagatctaagtctcca
gggcatcatcgtagtcacagacacagaagtcattccaaatcacctgaaagatctaagaaa
agtcacaagaagagtcgacgagggaatgaatag
DBGET
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