Chaetura pelagica (chimney swift): 104394654
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Entry
104394654 CDS
T08631
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104394654 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104394654 (CSTF3)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104394654 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
104394654
NCBI-ProteinID:
XP_010002574
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MAGIALLPADIADVPPPRATCRLLRGSDCSKRQRFLNGTAHDQPTRLQVTDTSRLLPAAR
QSDNTQRHPRNRARATGGNAHRAAPDGPRPSGPYSAALWADPVFWFLVSKRSLPPPAAHT
HVEELAFIPPAKRCSGARECSELLPVSALRKTGNALKTGSFSVFWFLAAEYVPEKVKKAE
KKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYD
KVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQI
WVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLA
KKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSN
PLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSD
EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYM
KFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGD
IPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASIL
KVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSTSELKALGYKDVSRAKLAAIIPDPV
VAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKL
LPPPVCFQGPFVQVDELMEIFRRCKLPDTVDEAVRIITGGLPEIAVEGNGPVENNAMLNK
AVKRPHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcagggatagctctcctgccagcagacattgctgacgttcccccaccaagagcaacc
tgccggctgctgcgaggaagtgactgttccaagaggcagcgcttccttaacggaacagcc
catgaccagcccacaaggctacaagtgaccgacacctcgcgcctcctgcccgctgcccgt
cagagcgacaacactcagcggcacccgagaaacagggcccgagccacgggaggaaacgcc
cacagagccgcccctgacgggccgcggccttcagggccctactcagcagccctctgggcg
gaccccgtcttctggttcctggtaagcaaacgctccctccccccccccgccgcacacacc
catgttgaggaactcgcgtttataccgccagccaagcgttgctctggggcgagggagtgc
tcggagctgctcccagtgtccgccctccgtaaaaccggtaatgccttgaaaacggggtct
ttctcagtcttctggttcctggctgctgaatatgttccagaaaaagtgaagaaagctgaa
aagaaactagaagaaaatccatatgaccttgacgcttggagcattctcattcgagaggca
cagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcccagttcccc
agttctggcagattctggaaactgtacattgaagcagagattaaagcaaaaaattatgac
aaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgatttatggaaa
tgttacctttcctatgtacgagaaaccaagggaaagctacctagttacaaagaaaaaatg
gctcaggcatatgattttgctctggataagattggcatggaaatcatgtcataccagatc
tgggtggattacatcaattttttgaagggcgtagaagcagtaggatcttatgcagagaac
cagaggataacagctgtccgtagggtttaccagcgtggttgtgtgaatccaatgataaac
atagaacagctctggagagattataacaaatacgaagagggcataaatattcacttagct
aagaagatgattgaagacaggagtagagattatatgaatgcacgacgtgtagcaaaggaa
tatgagacagtgatgaaaggtctggaccgcaacgctccctctgtccccccacaaaacacc
ccacaggaggctcagcaggtggacatgtggaagaaatacatccagtgggaaaagagcaat
cctctgcgtacagaggatcaaactctcataacaaaaagagttatgtttgcctacgagcag
tgcctgttggttctgggacatcacccagatatctggtatgaagctgcacagtacctcgag
cagtctagtaagctgctagcagaaaaaggggacatgaacaatgctaaacttttcagtgat
gaggctgctaatatttatgaaagagcgatcagcactttattaaagaagaatatgcttctt
tattttgcatatgcagattatgaagagagtcgaatgaagtacgagaaagtacacagcata
tataaccgactcctggctattgaagacattgatcccactctggtttatatccagtatatg
aaatttgcaaggcgagcagaaggcataaaatctggaagaatgatatttaagaaagcaaga
gaggatacccggacccgccaccacgtctacgtgacagcagctttaatggagtattattgt
agtaaggataaatctgtggcctttaagatttttgagctagggctgaaaaaatacggggac
attcctgaatatgtcctggcatatattgactacctttctcacctgaatgaggacaataat
acaagagttttgtttgaacgtgttttaacttcagggagccttccacctgagaaatctggg
gaaatctgggctcggtttttagcttttgaaagcaacattggtgacctggctagcatcctg
aaagttgagaagaggaggtttacggcattcaaggaagaatatgagggtaaagaaacagct
ctgctggtagacaggtacaagttcatggatctgtacccttgctctactagcgagctgaag
gcccttgggtataaggacgtctcccgtgccaagctggcagctataattccagaccctgtg
gttgcaccttccatcgtgcctgttctgaaggatgaagtagacagaaaacctgaatatccc
aaaccagacactcaacaaatgattccatttcagccaagacacttagcacctccaggttta
catcctgtcccaggcggtgtatttcctgttccaccagcagctgtagttctcatgaagctc
ctgccacctcctgtttgttttcagggtccctttgttcaagtggatgagctcatggagata
tttagaagatgcaaactgccagacactgtggatgaagctgtacgaataattactggaggc
ctacctgaaatagctgtggaaggcaatggacctgtggaaaataatgcaatgctcaacaag
gctgtgaagagaccacacgaagattctgatgacgacgaggagaaaggatctgtggttccc
cctgtacatgacatttacagagcacgacagcagaagaggatccggtga
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