Chaetura pelagica (chimney swift): 104394668
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Entry
104394668 CDS
T08631
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104394668 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
104394668 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104394668 (LSM8)
03041 Spliceosome [BR:
cpea03041
]
104394668 (LSM8)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104394668 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
104394668 (LSM8)
Spliceosome [BR:
cpea03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104394668 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104394668
NCBI-ProteinID:
XP_010002600
LinkDB
All DBs
Position
Unknown
AA seq
75 aa
AA seq
DB search
MIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSAL
DLGNIRAEPLNSVVH
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgggaaccctcaaaggtttcgatcagaccattaatctgattttggatgaaagc
catgaacgagtgttcagttcttcacaaggagttgagcaagtagtgctgggattatacatt
gtaagaggtgataatgttgctgtcattggtgaaattgatgaagagacagattcagctctt
gacttgggaaatattcgagcagagcctttaaactcagttgtgcattga
DBGET
integrated database retrieval system
