Chaetura pelagica (chimney swift): 104394753
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Entry
104394753 CDS
T08631
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpea04812
]
104394753 (KATNB1)
Cytoskeleton proteins [BR:
cpea04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104394753 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
PROPPIN
eIF2A
Beta-prop_VPS8
VPS8_N
Beta-prop_LRRK2
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104394753
NCBI-ProteinID:
XP_010002692
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MEEHGGTFPEGARRGKCGSAAVEDPAPGEVPVPEAPVTLRAALGWLRAEEITAHSSNVSS
LVLGKSSGRLLATGGDDCQVNIWSVNKTNCIMSLTGHTAPIESLQINTNEELIVAGSQSG
SIRVWDLEAAKILRTLVGHKANICSLDFHPFGSFLASGSLDTNVKLWDVRRRGCVYRYKG
HTEAVRCLRFSPDGKWLASAADDHTVKLWDLAAGKIMFEFTGHTGPVSVVEFHPNEYLLA
SGSSDRTVRFWDLEKFQVVSCIEEEATPVRCVLFNPDGCCLYSGFQDSLRVYGWEPERCF
DVVLVNWGKVADLSICNNQLIGVSFEKNTVSSFVVDLSRVTKSGSIAHGLMRDNEPLVPP
TPTGSSLRRIYDRPSTTCSKPQRVKHNSESERRSPSSEDDRDEKESKAEIQNAEDYNEIF
QPKNAICRTPPRNNEPFPAPPEDEPITAQEAVKSSQATDIQTPLPKQELLDPVQRPPIAS
STPLTRTEPSVIPAARNEPIGLKASDFLPAVKNQSQTELVDEEAMSQIRKGHETMCVVLT
SRHKNLDTVRAVWSISDIKNSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTIVLPQI
EKLLQSKYESYVQTGCTSLKLILQRFLPLITDILTAPPSVGVDITREERLHKCKLCYKQL
KNISNIVKNKSGLSGRHGSAFRELHLLMAVLE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcacggtggaacattccctgaaggggccagaaggggcaaatgtggatctgca
gccgtggaggaccctgcaccaggggaggtgcctgttcctgaagcccccgtgactctgcgg
gcagcgctggggtggctccgggctgaagagatcactgctcacagcagcaatgtctcctca
ctagtcctggggaaaagttctggccggctgctggcaactggaggagatgactgtcaggtc
aacatatggtcagtgaacaagaccaactgcatcatgagcctgacaggccacacggcgccc
attgagagcctacagatcaataccaatgaggagctcattgttgcagggtcccagtcaggg
tccattcgagtttgggacctggaagctgccaaaattcttcgtaccttggttggtcacaaa
gcaaatatctgcagccttgatttccatccttttggaagctttttggcatctggctctttg
gacacaaatgttaagctctgggatgtcagaagaagaggctgtgtctacaggtacaagggt
cacacagaagcagtccgatgtctccgcttcagtcctgatgggaaatggttggcctctgct
gctgatgatcacactgtaaagctgtgggatctggctgctgggaaaataatgtttgagttt
acaggacatactggcccagtaagcgttgtggaattccatcccaatgaataccttttggct
tctggtagctctgacaggactgttcggttctgggacttggagaagtttcaagttgtgagc
tgtattgaggaggaggccactcctgtcaggtgtgtgctcttcaacccagatggctgctgc
ttgtacagtggcttccaggactcactgcgtgtgtacggctgggagccagagcgctgtttc
gatgtggtcttggtgaactggggaaaagttgctgacttatctatctgcaacaaccagctg
ataggagtttcctttgaaaaaaacacagtctcttccttcgttgtggatctcagcagagtc
acaaaatctggttctattgctcatggactgatgagggacaacgagcctcttgtgccacct
accccgacgggatcctcccttcgccgcatctatgacaggccttccactacctgcagcaag
ccccagagagtgaagcacaactcagagagcgagaggcgcagccccagcagtgaagatgac
cgggatgagaaggaatccaaggctgagatccagaatgcagaggattacaatgagatcttc
cagcccaagaatgcgatctgtcgaactcctcctcgaaacaatgagccctttcctgcccct
cctgaggacgagcccataactgcacaggaagcagtgaagtccagccaagctactgacatc
cagaccccgctgccaaaacaggaacttcttgatccggttcagaggccaccaattgcttct
tcaactcctttgaccaggacagagccatcagtgattcctgcagccagaaatgaacccatt
ggcctgaaggcttctgactttttacctgctgtgaaaaaccaaagccagacggagcttgtg
gatgaggaagccatgtcccagatcaggaaagggcacgagaccatgtgtgtggtgctcacc
agccgccacaagaacctggacaccgtgcgagctgtctggagcatcagtgacatcaagaac
tctgtggactctgcagtggccatcaacgatctgtctgttgttgtggacctcttgaatatt
gtcaaccaaaaagcgtctctctggaagctggatttgtgtaccatagtcctgccgcagata
gagaagctactccaaagtaaatatgaaagttatgtacaaactggctgcacctctctgaag
ctcattctccagagattcctgccactgatcacagacatcctcactgcaccaccttctgtt
ggagtggacatcaccagagaggaaaggctccataaatgcaaactgtgctacaagcagctg
aaaaacatcagcaacatcgtcaagaacaagtctgggctcagcggccgccatggtagtgcc
ttccgggagctgcatcttctcatggctgtcctggagtga
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