Chaetura pelagica (chimney swift): 104394886
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Entry
104394886 CDS
T08631
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104394886 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104394886 (TAF5L)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104394886 (TAF5L)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104394886 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
104394886 (TAF5L)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104394886 (TAF5L)
STAGA complex
104394886 (TAF5L)
TFTC complex
104394886 (TAF5L)
SAGA complex
104394886 (TAF5L)
SLIK complex
104394886 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD_LRWD1
eIF2A
Ge1_WD40
Nbas_N
Motif
Other DBs
NCBI-GeneID:
104394886
NCBI-ProteinID:
XP_010002835
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MKIRSCLFSVSPSVCKTPIISFFSLEVMKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGL
RLSQTAEEMAANLTVQSESGCANVVSAAPCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVM
PLLYPLFVYLHLNMVQNGLKSTVDSFYSRFHGMFLQNASQKDIIEQLQTTMTIQDILSNL
KLRAFLDNKYVIRLQEDSYNYLLRYLQSDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGG
SSSRNESNGLEPSDVPASILQNEAALDLLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNT
AEISPNSKLLAAGFDNSCVKLWSLRSRKLKSEPHLVDVSRIRLACDILDEEEEEDDSAGT
EMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS
SCSLYFASGSHDRTARLWTFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW
STQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI
TSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELVGVYTGQMNNVLSVQFMA
CNLLLVTGIAQENQEH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacggagctgtttgttctctgtcagtcctagtgtgtgcaaaacccccatcatc
tctttcttttctctcgaggtcatgaaacgcgtacgcacagaacagattcagatggcagtg
tcctgctacctcaagcgccgtcagtacgtggactcagaaggtcccctaaagcaaggcctg
aggctgtctcagactgctgaagagatggcagctaatctcacagtccaatctgaatctggt
tgtgccaacgtggtgtctgcagctccctgcctggcggagccacagcaatatgaagtacaa
tttggacgattacgcaattttctcacagattcggattctcagcacagccatgaagtgatg
cctcttctgtatcccctcttcgtctacctccatctgaacatggtccagaatggcctaaaa
agcacagtggacagtttttacagccgcttccatggcatgttcttgcagaatgccagccag
aaggatatcattgagcagttgcagacaaccatgactattcaagatatcctgtccaacttg
aagctccgggctttcctggacaacaagtacgtcatccgccttcaagaggacagctacaac
taccttcttcgctacctccaaagtgacaacaacaacgccctgtgcaaagtcctgactttg
cacattcacctggatgtacaacctgccaagaggactgactaccagctgtacgctggtggg
agctcctcgcgcaacgagagcaacggcctggaacccagcgacgtgccagcttccattcta
cagaacgaggcagcgctggatttactgcaggacagcattaaacgtgtcaaggacgggccc
ccttccttaacgaccatctgtttctatgccttctataacacagagcagctgctaaacact
gcggagatttcaccaaatagcaagctgcttgctgctgggttcgacaattcatgtgtgaag
ctgtggagcttgcgttccaggaagttaaaatctgagccccatctcgttgatgtgtcccgc
atccgcctggcttgtgacatcctggatgaggaggaggaagaggacgacagtgcaggcaca
gaaatgaagatccttagaggacactgtggacctgtgtatagcacaaggttcctttcagat
agttcaggactcttatcttgttctgaggacatgtccatcagatactgggacctcggaagc
tttacaaacactgtgttgtaccaaggacatgcctatcccgtctgggatttggatattagc
tcctgcagcctgtactttgccagtggttcccacgatcgcactgccaggctctggacattt
gatcggacgtacccgctgcgaatatacgcaggccacttggcggacgtcgactgcgtcaag
ttccaccccaattccaactacctggcgaccggctccacggacaaaaccgtgcgcctgtgg
agcactcaacaaggcaactcggtgcggctcttcaccgggcaccgcggccccgtcctagca
cttgcgttttctcccaacggtaagtacctggcgtcagcaggtgaagaccagcggctgaag
ctgtgggacttggcatcaggaactctttacaaagaactgagggggcacacggacaacata
accagccttacttttagccccgacagtagtttaattgcttcggcatcgatggacaattcg
gtccgggtctgggacattcggaacacttactgcaatgcccctgcagatgggtcttccagt
gaactggttggtgtatataccggacaaatgaataatgtactgagcgtacagtttatggcc
tgtaatcttcttctagtgactggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
