Chaetura pelagica (chimney swift): 104394892
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Entry
104394892 CDS
T08631
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104394892 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104394892 (PNPT1)
03016 Transfer RNA biogenesis [BR:
cpea03016
]
104394892 (PNPT1)
Enzymes [BR:
cpea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104394892 (PNPT1)
Messenger RNA biogenesis [BR:
cpea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104394892 (PNPT1)
Transfer RNA biogenesis [BR:
cpea03016
]
Prokaryotic type
tRNA degradation factors
104394892 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OAF_N
Motif
Other DBs
NCBI-GeneID:
104394892
NCBI-ProteinID:
XP_010002845
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MELSSGKLARFADGSAVVQLGDTAVMVTAVSKTKPSASQFMPLVVDYRQKAAAAGRIPTN
YLRRELGSTDKEILTSRVIDRSIRPLFPVGYFYDTQILCNLLAVDGVNDPDILAINGASA
ALALSDIPWNGPIGAVRVGLVDGEAIINPTRKQMSSSALNLVVAGAPQNQVVMLEATAEN
ILQQDFCHAIKVGMKHTQQIIQGIQQLVKEQGVVKRTVQKLFVAPEEIVEYAKKLAFNKI
YAVFTDSSHDKISRDEAVNKIRLETEEQLKEKFPEAEPYEIMESFNVVSKDIFRNLVLNE
YRRCDGRDLTSLRDIKCEVNMFKMLHGSALFQRGQTQVLCTVTFDSIESSVKSDVISTAV
SGIKDKNFMLHYEFPPYATNEIGKVTGMNRRELGHGALAERALKPIIPQDFPFTIRVTSE
VLESNGSSSMASACGGSLALMDAGVPVSSAVAGVAIGLITKCGLEKGNIEDYRLLTDILG
IEDYYGDMDFKMAGTNKGITALQVDLKLPGIPMKIVMEAIQQATAAKREILQIMNQTLAK
PRPKRKESGPVVETIHVPLSKRLRFVGPGAYNLKKLQAQTGVTVSQLDEETYSVFAPTPS
AMHEAREFIGEICKDDQEVNLEFGAVYTATITEIRDSGVMVKLYPNMTPVLLHNSQLDQR
KIKHPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKILQSPATTVLKTLTDKDSIVLGGTL
PQSSTSSQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtcttctggaaaacttgctaggtttgctgatggatctgctgttgttcagcta
ggtgacacagcagtgatggtcacagcagtcagtaaaactaagccttctgcatctcagttt
atgccattagtggtcgactatcgtcagaaagctgctgcagcaggaagaattcctacaaac
tatctaaggagagaacttggttccactgacaaagaaattcttacaagcagagtaatagat
cggtcaatcagaccactctttccagtaggctacttttatgatacacagatcctttgtaat
cttttagcagtagatggtgtcaatgatcctgatattctggcaattaatggagcttctgca
gcacttgcattatctgatatcccatggaacggtcctattggtgccgtgagggtaggactg
gttgatggagaagctattatcaatccaactcgaaaacaaatgtcttctagtgctttaaat
ttagttgttgctggagctccacaaaatcaagttgttatgttggaagcaactgctgagaat
atattgcagcaagacttctgtcatgccatcaaagtagggatgaagcatacccagcaaata
attcagggaattcaacaactagtgaaggaacaaggtgttgtcaagagaactgttcagaag
ttatttgttgctcctgaagagattgtggaatatgcaaagaaacttgcttttaacaagatc
tatgcggtgttcacggattctagccatgataaaatttctagagatgaagcagttaacaaa
ataaggcttgaaacagaagaacagctgaaagaaaaatttccagaggctgagccttatgaa
atcatggaatctttcaatgtggtttcaaaggatatttttagaaatcttgtgctgaatgag
tataggaggtgtgacgggagagacttgacttccctcagagatattaaatgtgaagtgaac
atgtttaaaatgcttcatggatcagccttatttcagagaggtcaaacacaggttctctgt
accgttacatttgactccatagaatcaagtgtaaaatcagatgttatctcaacagcagtg
agtggaataaaagataaaaacttcatgctgcattatgagtttccaccttatgcaactaat
gagattggcaaagttactggtatgaacagaagagaacttggacatggtgcactggcagaa
agagctttgaaaccaattattccccaggatttcccattcacaatacgagttacttctgaa
gtcttagagtcaaatgggtcctcttcaatggcatctgcatgtggtggaagtttggcattg
atggatgcaggagttccagtatcaagtgcagtagcaggtgtagcaataggtctcattact
aaatgtggtctggaaaaaggaaatattgaggactatcgtttgctgacagacatcctggga
attgaagattattatggtgatatggacttcaagatggcgggtactaataaaggaataact
gccttgcaggttgatctgaagctgccaggaataccaatgaaaattgtcatggaagctatt
cagcaagctacagctgcaaagagggagatcttacaaattatgaaccaaacactggcaaaa
cccagacctaaaagaaaagaaagtggaccagttgtagaaactatccacgttccgttatca
aaaagattaagatttgttggtcctggggcctataatttgaaaaaacttcaagcacagact
ggtgtaactgtaagtcagctggatgaagagacctattctgtgtttgcccccacacctagt
gccatgcatgaagcaagagaatttattggtgaaatctgcaaagatgatcaggaagttaat
ttggaatttggtgcagtttatacagcaacaataactgaaataagagattctggagtgatg
gtaaaattgtatccaaacatgacaccagtgttacttcataattcacagcttgatcaaaga
aagattaaacatcctagtgccctgggattggaagttggacaagaaattcaggttaaatac
tttggacgtgatccaactgatggtagaatgaggctttcacgcaaaattctgcagtcacca
gccacaactgtgcttaaaaccctaactgacaaagacagcattgtcctgggaggtaccctt
ccacagtcatctacttcatcccagtga
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