Chaetura pelagica (chimney swift): 104394988
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Entry
104394988 CDS
T08631
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104394988 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104394988 (MID1)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104394988 (MID1)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104394988 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104394988
NCBI-ProteinID:
XP_010002952
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDSNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTSLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggaactgacctgccctatctgtctggagctgtttgaagatccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccggtggagtcaatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgtaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctcagtcagtgggcctaattcccccagcgagacc
cgccgggagcgggcattcgatagcaacagcatgtcatcttgcgagaaggtcctctgccag
ttctgcgaccaggaccctgctcaggaggcagtgaaaacctgcgttacctgcgaggtatcc
tactgtgaggagtgtctgaaagccactcaccccaacaagaagccgttcaccggccaccgt
cttatcgagcccatcccggactctcacatcagaggattaatgtgcttggagcacgaggac
gagaaagtgaacatgtactgcgtgactgatgaccagttaatctgtgccttgtgtaaactg
gtcggacgacaccgtgaccatcaggtggcagctttaagcgagcgctatgacaagctaaag
caaaatttggaaagtaacctcaccagccttattaagaggaatactgaactggaaactctc
ttggcgaaactcattcagacctgtcaacatgtagaagtaaatgcatcccgccaagaaaca
aagctgatggaagaatgtgaccagctcattgaaataatacagcaaagacgacaaataatt
ggaaccaaaatcaaggaaggaaaggtggtgaggttgagaaaactggctcagcagattgcg
aactgcaaacagtgcattgagcgctcgacgtccctcatctctcaggctgaacagtcgctg
aaggagaacgatcacgctcgcttcctgcaaacggctaaaaatatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaatgatacctttgat
actttcgcacttgattttaccagggagaagaaattgttggaatgccttgattaccttaca
gctcccaacccacccaccattcgagaagagctctgtacagcttcttatgataccattact
gtccactggacatcggatgatgagttcagcgtggtctcttacgagctgcaatacaccatc
ttcaccggacaagctaatgttgttagtttatgcaactctgccgacagctggatgattgtt
cccaatatcaaacaaaaccactacacagtgcatgggttacagagtggcactaagtacatc
ttcattgttaaggccattaatcaggcaggcagcagaagcagcgaacctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgcgcatagaaaattgaaagtgtct
catgataacttgacagtggaacgtgatgaaacatcctccaaaaagagtcatacgccagag
agattcaccagccaggggagctatggagttgctggcaacgtgttcattgacagcgggagg
cattactgggaggtggttataagcgggagtacatggtatgccattggcatttcctacaag
tcggcaccaaagcacgagtggatcgggaagaattccgcctcctgggtgctctgccgctgc
aataacacgtgggtggtgcgacacaacagcaaagaaatccccatcgagcccgctcctcac
ctccggcgcgtcgggattttgctggactatgacaacggctcccttgctttttatgatgct
ttgaactccctacacctttacacttttgacattacgtttgggcagccagtgtgccccacg
ttcactgtgtggaataagtgtttgaccattataaccggcttgcctatccctgaccaccta
gactcctccgagcagctcgcgtga
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