Chaetura pelagica (chimney swift): 104395040
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Entry
104395040 CDS
T08631
Symbol
HDAC4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104395040 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104395040 (HDAC4)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104395040 (HDAC4)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104395040 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104395040
NCBI-ProteinID:
XP_010003008
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MPKNRSAKELIDIYVYIYIFLFPDGLSGRDQPVELLNPPRVNHMPSSVDVTTALPLQVAP
TSVPMDLRLDHQFSMPVTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQH
EAQLHEHIKQQQEMLAMKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKES
AVASTEVKMKLQEFVLNKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQTGVSGT
YNHPVLGMYDSKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRP
LDVTGTSDSACNSAPGSGPSSPNNSSNNISAENGIAGSVTSIQAETSLAHRLVNREGSVT
QLPLYTSPSLPNITLGLPATGPSSGGSAQQDAERLTIPTLQQRISLFPGTHLTPYLSTTT
LERDGGTAHNPLLQHMVLLEQPTAQTPLVTDWYLSGLPLHAQSLVGGERVSPSIHKLRQH
RPLGRTQSAPLPQNAQALQQLVIQQQHQQFLEKHKQQFQQQQLHINKIISKPNEPARQHE
SHPEETEEELREHQALLEEPYGDRVTSQKEAPGLTNMVQVKQEPIESDEEEAEPQQELES
GQRQAEQELLFRQQALLLEQQRIHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATF
PMSVQEPPTKPRFTTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCE
CIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSD
TIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVA
IAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDE
VGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGH
PTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDP
LPEKVFQQRANANAVHSMEKVIEIHSKYWHSLQRSSSTVGYSLVEAQKCENEEAETVTAM
ASLSVGVKPAEKRPDDEPMEEEPPL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaataggtcagccaaggaattgatagatatttatgtgtatatatatatattt
ctctttccagatgggctttctggcagagaccagccagtagagctgttgaatccacctcga
gtgaaccacatgcctagctctgttgatgtgaccacagcactgcccttgcaagttgcacca
acttcagtccccatggacctgcgcttggaccaccagttttccatgcccgtgacggagccc
acgctgcgggaacagcagctccagcaggagctcctggcactcaagcagaagcagcagatc
cagagacagatcctcatcgccgagttccagcggcagcacgagcagctctcccggcagcac
gaggctcagctgcacgagcacatcaagcagcaacaggagatgctggcaatgaagcatcag
caggagcttttggagcaccagaggaagctggagcagcaccgacaggagcaggagctggaa
aagcagcaccgagagcagaaacttcagcagctaaaaaacaaagagaaaggaaaagagagt
gcagtggcaagcacagaagtgaagatgaagttacaagaatttgtcttaaataagaagaag
gccttggcacaccggaatctcaaccactgcatctccagcgacccccgcttctggtacggg
aagacccagcacagctctctggaccagagctccccaccccaaactggcgtatccggcacc
tacaatcaccctgtactggggatgtacgattccaaagatgacttcccactcagaaaaaca
gcctctgaacccaacctgaagctacggtccaggctaaagcagaaggtggcggagcggcgg
agcagccccctcctgcgcaggaaggacggcccggtggtcaccgcgctgaagaagcgccca
ctggatgtcacaggtacgtcggactctgcatgcaacagtgctcctggatctggtcccagc
tctccaaacaacagctccaacaacatcagcgccgagaatggaatcgcaggatcggtcacg
agtatccaagccgagaccagcctggctcacagacttgtgaatcgcgagggctcggtgaca
cagcttccactctacacatctccctctttgcccaacatcacgctaggactgcctgcaact
ggcccttccagtggaggatcagcacagcaggatgcagagagacttactatcccaacccta
cagcagaggatctctttatttcctggcacccacctcactccctacctgagcactacaacg
ttggaaagagatgggggaactgcacataaccctcttctgcaacacatggtcttactggaa
cagccaactgcacaaactcccttagtcacagactggtatctttcaggactgcccctccat
gcacagtccctggttggtggagaacgggtctccccttcaatccacaagctccggcagcac
cgcccgctggggcgcacgcagtctgctcccctgccccagaacgcccaggccctccagcag
ttagtaatccagcagcagcaccagcagttcttggagaaacacaaacagcagttccagcaa
cagcagctgcacatcaacaagatcatatccaaacccaatgaaccagctcgccagcacgaa
agccaccctgaggagacagaagaagagctacgggaacaccaagcccttttggaggagcca
tatggtgacagagtcacaagccaaaaggaggccccagggctgaccaacatggtgcaagtg
aagcaagaacccattgagagtgatgaggaggaagcagagccacagcaggagctggagtct
gggcagaggcaggctgagcaggagctgctcttccgccagcaagcccttctgttggagcag
caacgtatccaccagctgaggaactaccaggcgtcgctggaagcagctgggatgcccgtc
tccttcgggggccatcggcctctgtcccgtgcacagtcctcccctgcctcagccaccttc
ccaatgtctgtccaggagccacccactaagccaaggttcacaacaggccttgtgtatgac
accttgatgctgaaacaccagtgtacctgtggaaacacaaacagccaccccgagcacgcg
gggaggatccagagcatctggtcccggctccaggagacggggctgcggggcaagtgtgag
tgcattcgtggaagaaaagcaactctagaagagctgcagacagttcactcggaagcccat
acgctgctgtacggcacaaaccctctgaacagacagaaactggacagcaagaagcttcta
ggttccctaacgtcgatgtttgtcaggctcccttgcggtggtgtcggggttgacagtgac
accatttggaatgaggttcactcgtccggcgccgctcgcctggccgtgggttgtgtcatc
gagctggtgttcaaagtagccactggagaactgaagaatggatttgctgtcgttcggcct
ccgggtcaccacgcagaggagagcacacccatgggtttctgctattttaactctgtggca
attgcagccaagctgctccagcaaagactgaacgttagcaaaatcctgatcgtggactgg
gatgttcaccatgggaatggtactcagcaagctttctacaacgacccaaatgttctttat
atctcactacatcgctacgatgatgggaacttcttcccaggcagtggagctcctgacgag
gttggcacaggagcaggagtgggtttcaatgttaacatggccttcactggtggcctcgat
ccaccgatgggagacaccgaatacttaactgcgttcagaacggtagtgatgcccattgcc
aatgaatttgccccagatgtggtgctggtgtcatctggtttcgatgcagtggaaggtcac
cccacacctctgggaggatacaacctgtcagcaaaatgctttgggtacctgacgaagcag
ctgatgggcctggccgggggccgcgttgtcctggccctggaaggaggccacgacctgaca
gccatttgtgatgcctcagaagcctgtgtttctgctttgctgggaaatgagcttgaccct
ctcccagaaaaggttttccagcagagagcaaacgccaacgcggtgcattcgatggagaaa
gtgatcgagatacacagcaaatactggcactccctccaacgttcctcctccacggtggga
tactccctggtggaggcacagaagtgcgagaacgaggaggcagagacggtgacagccatg
gcctccctgtcggtgggcgtgaagccagctgagaagagacctgatgatgaacccatggaa
gaggaacctcccctgtag
DBGET
integrated database retrieval system
