Chaetura pelagica (chimney swift): 104395045
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Entry
104395045 CDS
T08631
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104395045 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104395045 (DHX36)
03012 Translation factors [BR:
cpea03012
]
104395045 (DHX36)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104395045 (DHX36)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104395045 (DHX36)
Translation factors [BR:
cpea03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104395045 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_14
NPHP3_N
Sir1
AAA_23
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
104395045
NCBI-ProteinID:
XP_010003014
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDERREEQIVQLLSTVQTKSEKEQESMSWWSGDEEGPTPEQPAKVKPVAEKAPVRQRPVL
EKTFLDRDVEYLFEKNEKDADLDEQLKEDLRKKKSDPRYIEMQKFREKLPSYGMKEELVN
LINSNRVTVISGETGCGKTTQVTQFILDDYIERGQGSMCRIVCTQPRRISAISVAERVAA
ERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHE
RNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIHIPGFTFPVVEYLL
EDVIEKLRYTPESTDRRPRWKKGFMQGHVSRPEKEEKEELYREQWPGYLRQLRGRYSAST
IDALEMMDDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDR
FIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFD
TQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE
LCLQIKILKLGGIAHFLSKLMDPPSRDAVMLAINHLMELNALDKQEELTPLGVHLARLPV
EPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLT
VVNAFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAGFVNSRDPKD
PKSNTNSDNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEE
TEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQS
PARIAHLVKNLRQELDDLLQEKIENPHPVDWNDIKSRDTAVLTAIIDLITTQENESARNY
APRFQGERYS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgcagggaagagcagatcgtgcagctgctgagcactgtccagaccaaaagt
gagaaggagcaagaatccatgtcctggtggtctggggatgaagaaggacctactccagaa
cagcctgcaaaagtgaaaccagttgctgaaaaagctcctgtgagacagagaccagtcttg
gaaaaaacatttcttgatcgggatgtggaatatctctttgaaaaaaatgagaaggatgct
gatttagatgagcaacttaaagaagacttaagaaagaaaaaatctgatcctagatacatt
gaaatgcagaaattccgagagaaactcccttcgtatgggatgaaagaggagcttgtaaac
cttataaacagcaatcgagtgactgtgataagtggagaaactggctgtggaaagacaacc
caggtgacccagttcatcctggatgattacatcgagcgagggcagggctccatgtgcagg
attgtttgtacccagcccagaaggatcagtgccatctctgtggctgagagagttgctgct
gaaagggcagaagcatgtgggaatggcaagagcacagggtatcaaattcgtctgcagagt
cggttaccaaggaaacaaggttcaattttatactgtaccacaggaattgtcctacagtgg
ctccagtcagataagcacttgtccagcattagtcatgtagtacttgatgaaattcatgaa
agaaatcttcagtcagatgttctaatgagcattattaaagaccttctgaatgttcgtttg
gatctgaaagtaattctaatgagtgcaactttaaatgcagagaagttttcagagtacttt
gatcattgtccaatgattcacatacctgggttcactttccctgtggtggaatatcttctc
gaagatgtaattgagaagctgaggtacactccagagagcacagaccgtcggccgcggtgg
aagaaaggcttcatgcaggggcacgtgagcaggccagagaaagaagagaaggaggagttg
tacagggagcagtggcccggctacttgcggcagctgcggggcaggtattcagcaagtaca
atagacgccttggaaatgatggatgatgacaaggttgaccttgaccttatagcagcactg
atcagacacatcgttctggaagaagaggatggtgcaattctagtgtttcttccaggctgg
gacaacatcagcactttgcatgatctattgatgtcacaagtcatgtttaagtcagatagg
tttattatcatacctttacattcactgatgcccactgttaaccagactcaggtttttaag
aagaccccgccaggagtaaggaaaatcgtgattgctaccaacattgcagagactagcatc
acaatagatgacgtcgtgttcgttatagatggtggaaaaataaaggaaactcactttgac
acccagaacaacatcagcacgatggcagcagagtgggttagcaaagctaatgccaagcag
aggaaaggccgggcaggaagggttcagccaggccactgttaccatctctacaatggactg
cgtgccagccttctagatgattatcagttaccagagatcttgaggacacctttagaagaa
ctctgtttacagatcaagattctaaagcttggtggaattgcccattttctgagcaaactc
atggatccaccatcccgtgatgctgtgatgttggccataaatcatctgatggagctgaat
gctttggacaaacaagaagaactgactcccctgggtgtccatttagcacgattaccagtt
gaaccgcatattggaaaaatgatcctctttggagctctgttctgctgcttggatccagtg
ctcacaattgcagccagcctcagcttcaaggacccttttgtcattcctctggggaaagag
aaagtagcagatgcaagaagaaaggaactgtcaaagaacactaaaagtgatcatctgact
gtggtgaatgctttcacgggctgggaagagactcggcgtcgtggtttcagaactgagaaa
gactattgctgggagtatttcctgtctccaaatacactccagatgttgcataacatgaaa
ggacagtttgctgagcatctccttgcagctggatttgtgaatagcagagaccccaaggat
cccaagtccaataccaactcagataatgagaagttgctcaaagcagtcatctgtgctggt
ttatatccaaaagttgcaaagatccgaccaagcttcagcaaaaagagaaaaatggtgaaa
gtttgcaccaagacagatggaacagttaatattcatcctaaatcagtgaatgtggaagaa
acagagttccattataactggcttgtgtaccatctgaagatgagaaccagcagcatttac
ctgtacgattgtacagaggtctctccatactgtctcctgttctttggaggagatatatcc
atccagaaggacaaagaccaggacaccatcgctgtggatgaatggattgttttccagtct
ccagcaagaatagcacacttggttaagaatttaagacaagagctcgatgatcttctacaa
gaaaaaatagaaaacccacatcccgtggactggaacgatattaaatccagggatacagca
gtactgacagctattatagacttaatcacaacacaggagaacgaaagtgccagaaactat
gctccacggttccagggtgaacgctatagttga
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integrated database retrieval system
