Chaetura pelagica (chimney swift): 104395072
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Entry
104395072 CDS
T08631
Symbol
MED12L
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 12-like protein
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104395072 (MED12L)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
104395072 (MED12L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
104395072
NCBI-ProteinID:
XP_010003043
LinkDB
All DBs
Position
Unknown
AA seq
1790 aa
AA seq
DB search
MRLLKLSFCFLPLERSLQDELTAVNVQQGFSNQPAFPGAEHGSARNVLINTSKVGAYFSS
ILAEKLKLNTFQDTGKKKPQVNAKDNDWLVTARSQSAIHSRFTDLAGGKPLTLLAEKVPI
LSKKEDIFAYLAKYSVPLLRAAWLLKVTCAYYAAISEAKIKKHQPTDPHIEWTQIITRYL
REQLAKVAEFYHVSSSPGSSSVVMPQEMEQALEKWEYNEKLSFYMFQEGMLGRRECLTWV
LGVLEKIRPTAHELLKLLLPLTLQVWAKIEEAEQQIKQRGRAVEVPWPFAKCQESAAEVT
ICWVLHTLEVLDQHCFDRSDSTNSMDTLYHKIFWANQSKDNQEVAFPCLAPSDEAVVTLL
CEWARCGESEVLDEKESLSSASLTGSSLPVFQDVLLRFLDTQAPSLSDPNSDREKTEFVN
LVLLFSEFTWHNSFSHDAYMCTLISRGGSHCHPQTTLASGETVEEHYSKGHDGKLEMFSP
MPGEPCENVNSSLDRRTSVASEKSAKRERLRGVIFPSNYELLRHLQYATRFPIPLDESSS
HECNQRMILLFGVGKERDEARHQLKITKDILKILNKKSTTELGVGAEGQQGRKTKQGALP
TLGTVFTKLQQLSYFDQHQVTSQISSNVLEQITSFASGXHLPLAHHIQLIFDLMEPALNI
NGLRDFAVQLLNELSEVEAELLLKCSRLAGRCTAGXXXXXVTARGTFLGCAGTGSERCYL
CRLCGVVKHVANPSECSSSERXYFVSCSHLRSRFGDLFSSACSKVKQTIYSNVQPSNSNL
LWDPEFMLDFIENPSAHSINYWMLGKILSDSAGNRCSLVCNALLNVCMGHQDAGRXEWNG
MGWMLKELAASCTLLSSQWLGVLKALCCSSNHVWGFNGLLCSVDVSDLSFRDSLATFIAI
LIARQRFSLEDVVQHVALPSLLAAACGDPDAEPGARMTCRLLLHLFRTPQVYLFPQGTGK
LFPGIRSSCDRHLLAAAHNSTEVGAVFAVLKAILMLGDAEMGSSSLKSEDFQRRGLXDGC
SEDEIWGSSHTWKSCGKAVSMETASLSEYARYVLRTICQQEWVGEHCLKEPKRLCTDKDL
ILDPVLSNKQAQKLLHLICYPHGVKECSEGDSPHRQRVKHILQNLDQWTLSQSWLELQLM
IKQCTKEPGSGSVAEMNSLLDNIAKATIEVLQQSAELNNNSSNSAIGLFSPNSVGNADTS
NTRQNGKKPFLSSSEQRGVWLXAPLIAKLPTSVQGRILKAAGEELEKGQHLGSSSKKERD
RQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLQNQVNQILSNWREGRYQDDVKAW
PVTHGALQLHLNLVGGMFDTMQRSTQGTTDWALLLLQIITSGTVDTQTNNELFTTVLDML
GVLINGTLACDLSNMSQGGPEENKRAYMNLVNKLKELGDKCSESIDRVRXLLPLPKQACE
IITCEPMGSLSDTKGNKIAGFDSIDKKQGLQVSSKQKVSPWDLFEGHTNPAPLSWAWFGT
VRVDRKVIKYEEQQHLLLHHTHTKPKPRSYYLEPLPLPPEEEEEEEPTTPVSQEPERKPR
ELSDQGKLATDDEKKTKSRKRKSKSSSRSDVSNWCPLQRCPPLPPALMQPPPPALWGCSV
LGQPQPPGFVLQSQPPPAGGSRLDPTGPFVPATTKRALSQLLPPPALPPQHPLLRMKLLQ
QEQQQQQRLLRHQAQTRALQQGQPMDQAAIFAPQVGPVSQLPQHPGLQQAQGVPHGYTTF
GGPPGDQLDGASAAPAPVPLPPELLRQQVQQQRLFQLQCTVSGGDSDSLW
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcttaaactgtccttttgctttttgcccttggaacgctccttgcaggatgag
ctcactgcagtgaacgtccagcagggcttcagcaaccagcctgccttccctggagccgag
cacgggtcggccaggaacgtcctcatcaacacctccaaggttggcgcttatttcagcagc
atcttagcagaaaagctaaaactcaacactttccaggacacagggaagaagaagccacaa
gtaaatgccaaagacaacgactggctggtgactgctcggtcccagagtgccattcacagc
cggttcacagacctggcaggaggtaaaccactgactcttctagcagaaaaggttcccatt
ctcagtaaaaaagaagatatttttgcttacttagcaaaatactctgtgccactgctgcga
gcagcatggctgctgaaagtgacatgtgcctactatgctgctatttctgaagctaaaatc
aagaaacaccagcccaccgacccacatattgaatggactcagatcataaccaggtacctg
cgagagcagctggcaaaggtggcagagttttatcatgtgagttccagcccgggcagcagc
tccgtggtgatgcctcaggagatggagcaagccctggagaagtgggaatataatgaaaaa
ctgtctttttatatgtttcaggaagggatgctggggagacgtgagtgtttgacctgggta
ctgggtgttctggaaaagatcagacccactgcccatgagctgcttaagctgttgttgcca
ctaacgttgcaggtttgggcgaagatcgaggaggcagagcagcagataaagcagcgaggc
cgcgccgtggaggtgccatggccttttgccaagtgccaggagtcagctgcagaggtgacc
atctgttgggttctgcacaccttggaagtcttggatcagcattgctttgacagatcagat
tccaccaattccatggacacactttatcataagattttctgggcaaatcagagtaaagat
aaccaagaggtggcttttccttgtctggccccgagcgacgaggcggtggtgacgctgctg
tgcgagtgggcgagatgtggtgaatctgaagtcctagatgaaaaggaatctctgtcttca
gcctccttgacaggttccagtcttcctgtttttcaggatgtcctgctgaggtttttagat
acacaagctccctcactgtctgacccaaatagtgaccgtgagaagacagagtttgtgaat
ttggtgctgcttttttctgagttcacttggcacaacagcttctcccacgatgcctacatg
tgcactttgatatcccgggggggcagtcactgccacccccagaccacgctggccagtggg
gagactgtggaggaacactattccaagggtcatgatgggaaactggagatgttttctccg
atgcctggggagccttgtgagaatgtgaactcttctttagacagaagaacctcagtggcc
agcgagaagtcagccaagagggaaaggctgagaggagtgattttcccatccaactacgag
ctccttcgccacttgcagtacgcgacacgtttccccatccccctggatgaatcttcaagc
catgagtgcaaccagcgcatgattctcctgtttggcgttgggaaggagcgtgacgaagcg
aggcaccagctgaagatcaccaaagacatcctcaaaatcctgaacaagaagagcacgacc
gagctgggcgtgggggctgaagggcagcaaggcaggaagaccaagcaaggagcattgcca
accctagggaccgtgttcacaaaactgcagcagctgtcctattttgatcaacaccaggtg
acatctcagatctccagtaacgttctggaacagataactagttttgcctcaggannacat
cttcccttggctcaccacatacagctcatctttgatctcatggagccagcactgaacatc
aacggacttagagactttgcagtacagctgctgaacgagctgagcgaggtggaggccgag
ctgctgctgaagtgctccaggctggcggggcgctgcaccgcgggggnnnnnnnnnnnnct
gtgacggcaagaggcacctttctggggtgcgcggggacaggctcagagaggtgttacctc
tgcaggctgtgcggggtggtgaaacacgtcgctaacccctcggagtgctcctcctcagaa
aggnggtattttgtgtcctgtagtcacctgagaagcaggtttggagacctcttcagtagt
gcctgttctaaggtgaagcaaaccatatacagcaatgttcagccttcaaattccaacctg
ctgtgggacccggagttcatgctagattttattgagaatccttcagctcacagcatcaac
tactggatgctgggcaagatcctgagcgacagcgcaggcaaccgctgcagcctcgtgtgc
aacgcgctgctgaacgtctgcatgggccaccaggatgcaggcaggtgagagtggaacggc
atgggatggatgctgaaggagctggcggcgagttgcaccctgctcagctcccagtggctg
ggggtgctgaaggctctttgctgctcttccaaccatgtctgggggttcaatggtctgctc
tgcagcgtggatgtgagcgacctgtcgttccgtgactccctggccactttcattgctatc
ctgattgcccggcagcgcttttctctggaagatgtggttcagcatgttgctctgccttcc
cttcttgcagctgcctgtggagatccagatgctgagcctggggccaggatgacctgccgg
ctactcctgcacctcttcaggaccccccaggtctacctctttccccagggaacagggaaa
ttatttcctggaattcgttcctcttgcgaccgtcacctcttggctgctgctcacaacagc
acagaagtgggagctgtatttgcagtcttgaaagcaattttgatgcttggtgacgccgag
atgggcagcagctccttgaagagtgaagacttccagaggagaggcttgtgagatgggtgc
agtgaggatgaaatctggggttcctctcacacttggaagtcctgtggaaaagctgtttcc
atggaaaccgcgagtttaagtgagtatgcgagatacgtgctcagaacaatctgccagcag
gagtgggttggagagcactgcttaaaagaacccaagaggctgtgcacagacaaagatctt
attttggatcctgttctttcaaacaagcaagcacagaagctccttcacctgatctgctac
ccgcacggtgtcaaggagtgcagcgagggtgacagccctcacaggcagcgcgtcaagcac
atcctgcagaacttggatcagtggactctcagtcagtcttggttggagctgcagctgatg
atcaaacagtgcacgaaggagcctggttctgggtctgtggctgaaatgaacagcttgttg
gataatattgcaaaggcgacaatagaggtgttgcagcaatccgctgagctgaacaataac
tcctctaactctgctataggcctcttcagcccaaactctgttggaaatgctgacacaagt
aatacaagacagaatggtaaaaagccattcctaagctcctctgagcagagaggagtgtgg
ctgngtgcccccctgattgcaaaactgcccacctctgtgcaaggtaggatcttgaaagct
gcgggagaggagctggagaaagggcagcatttggggtcatcttctaagaaggaaagagat
agacagaaacaaaaaagcatgtccctcctgagtcagcagcctttcctctcattggtgctc
acttgccttaagggacaggatgagcagcgggaagggcttctaacatcactgcagaatcag
gttaatcagatccttagcaactggagggaggggcggtaccaggacgatgtcaaagcttgg
ccagtgacgcacggagccctacaacttcatctcaacttggtgggtggcatgtttgacacc
atgcagaggagtacccaggggaccacggactgggcactgctgctcctccagatcatcact
tcaggaactgttgatacgcagaccaacaacgagctgttcacaaccgtgctggatatgctg
ggtgtcctcatcaacgggacactggcctgcgacctgtccaacatgtcccagggagggcct
gaggagaacaaaagggcttacatgaacttagtgaataagctaaaagagctgggggacaag
tgctctgaaagcatcgacagggtccganngctgctgccactgcccaagcaggcatgtgag
atcatcacctgtgagcccatgggatccctgagcgacaccaagggcaacaaaattgcagga
tttgactccattgataagaaacagggtcttcaggtttcatcaaaacaaaaggtgtcccct
tgggatttatttgaaggtcacacaaatcctgctcctctctcctgggcatggtttgggacc
gttcgtgtcgacaggaaagtgatcaagtatgaggagcagcagcatctcctcctgcaccac
acacacaccaaacccaagccacggagttactaccttgagcccttgccccttcctccagag
gaggaggaggaggaagagcccaccactcctgtctctcaggaaccagaaagaaagccaaga
gagctctcagatcagggaaaacttgccacagatgatgagaagaagacaaagagcaggaag
cgaaagtcaaaatcaagctcaaggtctgatgtaagtaattggtgtcccctacagaggtgc
cccccgctcccccccgctctgatgcagccccccccgcctgccctgtggggctgcagcgtc
ctggggcagccgcagccccccggcttcgtcctgcagagccagcccccgcccgcaggaggc
tccaggctggatccgacaggcccctttgtgccggcgaccaccaagcgggcgctgtcccag
ctgctgccgccccccgcgctgccgccgcagcacccgctgctccgcatgaaactcctgcag
caagagcagcagcagcagcagcggctcctcaggcaccaagcacagacacgggctctccaa
cagggtcagccgatggaccaagctgctatttttgctcctcaggttggcccggtgtctcag
ctcccacagcacccagggttgcagcaagcacagggagtgccccacggatacaccacgttc
ggcggcccccccggggatcaactggacggtgcctcggccgctcctgccccggtgccgctg
cccccggagctactgaggcagcaggtgcagcagcagaggctcttccagttgcagtgcaca
gtaagcgggggcgacagcgacagcctctggtaa
DBGET
integrated database retrieval system
