Chaetura pelagica (chimney swift): 104395135
Help
Entry
104395135 CDS
T08631
Symbol
DEPDC5
Name
(RefSeq) LOW QUALITY PROTEIN: DEP domain-containing protein 5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104395135 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104395135 (DEPDC5)
Membrane trafficking [BR:
cpea04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
104395135 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
104395135
NCBI-ProteinID:
XP_010003112
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPETHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNNRDASLGTPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FRXEACECPSSRSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPHLH
QCEVSSSLGYTSTRDVLENMLEPQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALINPF
APSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELLEL
AYHEAAGRHISARHPGDSTSFLSFSGTEEYSNGLAGSSSAGMNLKTQNKDTLEGAVSNSP
DPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPEADIDRRDEEG
VQMTAQQVFEEFICQRLMQGYQIIVQSKPQKTTTTVPPPLSSSPLYSRGLVSRNRPEEED
QYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSEFVSCWVEFSH
ERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIVEGEAHCDVYG
DRPRSDEEEWQLLDGFIRFVEALNRIRRRHRSDRMIRKGSAMKGLQIAGPIPTHSLEQSG
PHIVKKGTSALSALLQMEASQKTLGEQQAAMLSGKSSGQPSESGSIAITPTYMDSPRKDG
AFFMDFVRSPHTASSFYSQVSIDQSVPATSDGNILTNTGQLPDRGNTQTFGSSQNVAEQG
YTTAGAAEGSSQCSASTLTSSSTLIEILEAMKHPTTGIQLLSEQKGLSPYCFISAEVVHW
LVNNVEGVQTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVVDKEPDRVGMQQ
PAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASYASRHSSFSRSF
GGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVT
AAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNVSCLLKEGSE
HLFDGFEPETYWDRMHLLQEAIAYRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLP
YSKRKFSCGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSSATGDEKFADRLL
KDFTDFCWNKDSRLVLFWTDCLDKMHASAP
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacataagaagggttttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatcccaatgatgaatacagtcccctgcttctacaggtgaagtcacttaaggaa
gatttgcagaaagaaactataagtgtggatcagacagtggcacaagtgttccgactgcgg
ccctaccaggatgtccatgtgaatgttgttgacccaaaggaggtgacattggacttggtg
gagctgaccttcaaggatcagtatattgggcgtggggatatgtggcgactgaagaagagt
ttggtcagcacgtgtgcctatgtcacccaaaaagttgaatttgcaggtatcagggcacag
gcaggtgaactgtgggttaagagtgagaaagtcacttgtggatacatcagtgaggacacc
cgggtggtcttccgctccacttctgccatggtttatatttttatccagatgagctgtgaa
atgtgggattttgatatttatggggacctatattttgagaaagctgtgaatggtttcctt
gctgacctcttcacaaaatggaaggagaaaaactgcagccatgaagtgacagtggtttta
ttttctagaacattttacgaagcaaaatctatagatgagttccctgaaacgcatcgggca
tcgattcggcaggatcatgagggaagattttatgaagatttttacaaagttgtagttcag
aatgagagacgagaagagtggacctcattgctcgtgaccattaaaaagcttttcatccag
tatcctgtgttggtacgactggagcaagcagagggctttcccccaggttacaattctacc
tcggcacaagggaactacctggaggccataaatctttcattcaatgtgtttgacaagcac
tacataaaccgtaacttcgaccgcacagggcagatgtcggtggttatcacacctggtgtg
ggtgtgtttgaggtggatcgactgctcatgattctgaccaagcagcggatgatagacaat
gggataggtgtggacttggtatgcatgggagaacagccattgcatgctgtaccactcttt
aagctgcataatcgctgtggacctggtgactccagattgggtgatgactacaatattcca
cactggataaaccacagtttctacacatccaaaagtcagctcctgtgtaacagcttcact
ccacggatcaagctggcaggaaggaaacccctgactgagaaagcaaaaaataaccgagat
gcctcactggggactccaaaagatgctgagaatgccctgcctatccaggtggattatgat
gggtatgatgcccaggtgttcagactgccaggtccatccagagcccagcgctgtaccacg
ttcaggtaagaggcttgtgagtgtcctagttctagaagctctagttcctacgacgtctcc
tgcagcccttccctgcagagccgcacgctaccccccgaggaggtgaggagccaggcttct
gatgacagctccctgggcaagatctccaacatcctgatgatcccacggcctcatctgcac
cagtgtgaagtcagcagctctttgggctataccagcaccagagatgtccttgagaacatg
ctggagcctcagcaacgtgactccagtgccccggggaggttccacgtgggcagtgcagaa
tccatgctgcacatccggcctgggggctacaccccccagcgagcgctgatcaaccccttc
gccccttcccgaatgcccatgaagctgacgtccaaccggcggcgctggatgcacaccttc
cccgtgggtccctcaggagaagctatccagatccatcatcaaacccgacagaatatggca
gaaatgcagggcaatgggcagcaggatttgacacattcctctgctgagctgctggagctg
gcttaccacgaggcagctgggagacacatcagtgctcggcatccaggtgacagtacctct
ttcctgagcttcagtggaacagaagagtactccaatggtctggctggcagcagcagtgca
gggatgaatcttaaaactcagaacaaggatactctggaaggtgctgtctctaactctcca
gatccaatgccaggcttctgttgtacagttggagtggactggaaatctctcactactccg
gcgtgtctgcctcttaccaccgactacttccccgaccgtcagagcctgcagaacgattac
actgagggttgctatgatctcctcccagaagctgacattgacaggagggatgaggaagga
gtgcagatgacagcccagcaggtgtttgaggagtttatttgtcagcgtctcatgcaaggc
tatcaaattattgtgcaatccaagccacagaaaacaaccacaactgtgccacccccactc
agcagcagtcccctttacagtcgaggtcttgtgtcaagaaatcgacctgaggaagaagat
cagtactggctgagtatgggccgtaccttccacaaagtcacattaaaagacaaaataata
actgtgactcgatacctgccaaagtatccatatgaatctgctcagataaattacacttac
agcttgtgcccctcacactctgactctgaatttgtctcttgctgggtagaattttcccat
gagagactagaagagtacaagtggaattacttggatcagtatatctgttctgctggctct
gaggatttcagccttatcgaatccctgaaattctggaggacccgcttcctgctcctgcct
gcctgcatcagcgccaccaagcgcatcgtggaaggagaggcgcactgcgacgtgtacggg
gacaggccccgctcggacgaggaggagtggcagctcctggacggcttcattcgcttcgtg
gaggccttgaaccgcattcgccggcgccatcggtctgatcggatgattcggaaagggtct
gccatgaagggcttgcaaattgctggtccaattcccacccattctttggagcagtctggg
cctcacattgtgaagaaaggaacctctgcactctcagctctgctacagatggaagccagt
cagaagacactgggggagcagcaagcagcaatgctgtctggtaagagctctgggcagcct
tcagagagtgggagcattgctatcacacccacctatatggacagccctcgtaaggatggg
gccttctttatggattttgttcgcagcccacatacagcttcaagcttctactcacaggtc
tctatagatcagtcagtacctgcaacctcagatggcaacatattgacaaacactgggcag
ttacctgatcggggcaacacgcagacctttggaagttcccagaatgttgcagagcaagga
tacaccacagctggtgctgcagagggcagctctcagtgttcagcaagcactctgacttcc
tcctccaccttgatagagattcttgaagccatgaaacaccccaccacagggatccagctg
ctctctgagcagaagggcctctctccgtactgcttcatcagcgcagaagttgtgcactgg
ctggtgaacaacgtggaaggtgtgcaaacccaggccatggccattgacataatgcagaaa
atgctagaagagcagcttattgtccatgcatctggagaagccttacgaacctttatttac
ggcttttatttttacaagattgttgtggacaaagaaccagaccgagtgggcatgcagcaa
cctgccatgtggcacacagctgccatggatgacttctctgccttccagaggaaatggttt
gaggtggcatttgtggcagaagagctcctgcactcagaaatcccagccttcttccttccc
tggctgcccagccgcccagcctcctatgcaagtaggcacagttcctttagccgcagtttc
ggaggacggagccaggcagctgcactattagctgccacagtgcctgagcagcggacggtg
acgctcgatgtggatgtgaacaaccgcacagaccggctggagtggtgcagctgttattac
catggcaatttctccctgaacgctgcctttgaaatcaagttacactggatggcagtgact
gcagctgttctttttgagatggttcaaggttggcatcggaaagccacatcctgtggtttc
ttgctggttccagtcttggaaggcccgtttgctttgcccagttacttatatggagaccca
cttcgagctcagttgttcatcccactcaatgtcagctgcttgttgaaggagggtagtgag
catttgtttgatggctttgaaccagaaacatactgggaccgtatgcatctcctccaggaa
gcaatagcatacagatttggatttgtgcaagataaatactcagcctctgccttcaacttc
ccagctgagaacaagccccagtatatccatgtcacagggacagtgttcttgcagctacca
tattccaaacggaaattctcatgtgggcagcagcgccgccggcgcaactccaccagctcc
accaaccagaacatgttctgtgaggagcgcattggctacaactgggcctacaacaccatg
ctgaccaaaacctggaggtccagtgccacgggggatgagaagtttgctgatcggttgctg
aaagacttcacagacttctgctggaacaaagatagccggcttgttttgttctggactgac
tgcctagataagatgcatgctagtgctccgtaa
DBGET
integrated database retrieval system
