Chaetura pelagica (chimney swift): 104395301
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Entry
104395301 CDS
T08631
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cpea03037
]
104395301 (NPHP1)
Cilium and associated proteins [BR:
cpea03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104395301 (NPHP1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
cpYpsA
hSH3
Motif
Other DBs
NCBI-GeneID:
104395301
NCBI-ProteinID:
XP_010003296
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MRLFLLLAKPVPFGHWWRLVNLIRRVEALQAESAAPAPGQRQSLSLRCMELKKLVDENTN
ALHYLKKADEPAPVGNYNQRKEEEEKLLHKLSQQLQKLVLTLDQDKVAMNDGVAGESRED
PQTEDENGKEDESEDEESSEEEESEETDDDEDELLNDPNVKECVAVGNFSAQQEGDLAFT
KGEVLHIHEKKVDGWWVAENSKGERGLVPRTYLAVRREDSESQERSGEHIEVVDETADGT
EIKKRTDSHWSAARRAIAENDTVEVLATIGAVPAGFRLSTLFQLLEEGNQFRASYFLKPE
LTPSQLAFKDLVWNSEKNTIYPRPTRVSLIVTLCSCKMIPLPGVSIQVLSRHVRFCLFDG
NRVLSNIHTVRATWQHKNPQTWTFSPRVTGILPSLLDGDCFIRSNSLSSDIGILFELGIT
YIRHSTGERGELSCGWAFLKLFTSNGMPVPSKMYELLIQGGTPYERGVEVGPSISRRAGS
GVFHQFIALKKQPVLVVKLRSLSAQSKDILNLLPETLIGSMCYIHLLILYRQILGDALLK
DRISVQSTDLICNPILATFPQLLDEPDLMDALRSAWADRERKLKRSEKRDQEFLKSLFVL
VYHDSVFPLLQSTLLPEYRWAEEESEASRWKVIANFLKESQENDGALQYLLSSENTHKAF
DIAELAYDFLGEVRKNNPEI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtttctcttattagcaaaacccgtacctttcgggcactggtggcggctggtg
aatctcattaggcgggtggaggcgctgcaggcggagagcgcggccccggcccccgggcaa
cggcagagcctgtcgctgagatgtatggagctgaagaaattggtggatgagaatacaaat
gctcttcattatttgaaaaaagctgatgagcctgcacctgtggggaattataaccagagg
aaagaagaagaagaaaagctactacataaactctctcagcaacttcagaaacttgttctt
accttggatcaggacaaggtggctatgaatgatggagtggctggggagagccgggaagat
cctcaaacagaagacgaaaatggaaaagaggatgagagtgaagatgaagaaagtagtgag
gaggaagagagtgaagaaacagatgatgatgaggatgaattgttgaatgatccaaatgtt
aaagaatgtgttgcagttggaaacttcagtgcacagcaggaaggggatctcgcgtttacg
aaaggtgaagtcctacatattcatgagaagaaggtggatggctggtgggtagctgaaaac
tccaaaggggagagaggcctcgttcctagaacctaccttgcggtccgacgtgaagatagt
gaaagccaagagcgaagtggagaacacatcgaagtggtggatgaaacagcagatggaact
gaaattaaaaaaagaacagattctcattggagcgctgcaagaagagccattgcagagaat
gacacagtagaggtactggcaaccataggagcagttcctgcaggattccgcctatccaca
cttttccagctcttagaagaaggcaatcaatttcgagccagttacttcttgaagcctgaa
cttactccttcccagttggctttcaaagacttggtgtggaactctgaaaaaaatactatc
tatcctcgaccgactcgagtgtccctgattgtaacgttatgtagctgtaaaatgattccc
ctccctggggtcagcatccaggttctcagtagacacgttcgattctgtctgttcgatggc
aatcgggtgctgagtaacattcacacagtgagagctacgtggcaacataaaaatcctcaa
acatggaccttttctccaagagtaacgggcattttacccagcttgcttgatggtgactgt
ttcataaggtccaactctctgtcttcagacattggtatattatttgaacttggcatcact
tatattcgccattcaacaggtgaaagaggagagctaagctgtggctgggcatttctgaag
ctttttacttctaatggaatgcctgttccctccaagatgtatgagctgctaatacagggg
ggtactccctatgagagaggcgttgaggttggcccatcaatatcaagaagagcaggcagt
ggtgtttttcatcagtttatagcactcaagaaacagccagtgcttgtggtgaaactgagg
tcattaagtgcgcagtcaaaagacatcctgaatttgctaccagaaacattaattggcagc
atgtgctacatccacctcctgatactttatcgacaaatacttggtgatgcactcctgaaa
gacaggataagcgtgcaaagcacagatttaatctgtaatcctattttagcaactttccct
caactcttggatgaaccagacctgatggatgcactccggagtgcttgggcagatagagaa
agaaagctgaagagatctgagaagagagatcaagaatttctgaaatctctgtttgtcctg
gtgtaccacgactccgtcttccctctcctccagtccaccctcctccctgagtacaggtgg
gctgaggaagagtcagaagcatctcgctggaaggtgattgctaactttttgaaagagagc
caagagaatgatggtgcgcttcagtatctgctgtcatcagaaaacactcacaaagccttt
gatattgcagagctggcttacgatttcttaggagaagtgaggaaaaacaatcctgaaata
tga
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