KEGG   Chaetura pelagica (chimney swift): 104395411
Entry
104395411         CDS       T08631                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpea04131]
    104395411 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpea04147]
    104395411 (COPB2)
Membrane trafficking [BR:cpea04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104395411 (COPB2)
Exosome [BR:cpea04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104395411 (COPB2)
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 104395411
NCBI-ProteinID: XP_010003403
LinkDB
Position
Unknown
AA seq 982 aa
MGSLQFLIKSGTSIWRQCWEKFSQQPGPCALEVPKKSHSPKLFCLMVFEVTVSVALPAKS
RLRETRHSLAHPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLV
KTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPT
QPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVW
QLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQ
NVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGY
DEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGS
CEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNS
VVKIFKNFKEKKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFW
SDSGELVCIATEESFFILKYLSEKVAAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWV
GDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVS
VLEYQTAVMRRDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQ
LGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNAN
MVNKLAEGAEKDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVV
KLWRESLSKVNQKAAESLADPTEYENLFPGLKEAFVAEEYVKQSLADLRPAREYPLVTPN
EERNLLEEAKGFEPSGVTAPQVSAEEKFPSPKQEMKTVLQNSDPLPTKDQKTLLDLEDDL
DNLDLEDIDTTDINLDEEILDE
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggggagtttgcaatttctaattaaaagcggaacttccatctggcggcagtgctgggag
aaattttctcaacagccgggtccttgcgctctggaggttcccaaaaaatctcattcccca
aaacttttctgcttgatggtgtttgaggtcacagtatctgtagcgttacctgccaaaagc
aggctaagggaaacacgtcacagcctggcgcaccctctccgacttgatataaaacggaaa
ctgacagcccgatctgaccgggtgaagagcgtagacctacatcctacggagccatggatg
ttggccagcctttacaatggcagtgtctgtgtttggaaccatgaaacacagactctggtg
aagacttttgaagtgtgtgacctgccagtgagagctgccaagttcgtggcaagaaagaac
tgggttgttacaggagctgatgacatgcaaattagagtttttaattataacaccttggaa
agagttcacatgtttgaagcacattcagattacattcgttgtattgctgtgcatccaaca
cagcctttcatactgacaagcagtgatgacatgctcattaaactctgggactgggataaa
aagtggtcttgttctcaggtgtttgaaggacacacccattatgtcatgcagattgtcata
aacccaaaagacaataaccagtttgccagtgcctctctggataggacaatcaaggtgtgg
cagcttggttcttcttcacccaacttcactttagaaggccatgagaaaggagtgaactgc
attgactattacagtggaggagacaagccatacctcatttcaggtgcagatgaccggttg
gttaagatctgggactatcagaataaaacatgtgtacaaacactggaaggacatgctcaa
aacgtgtcatgtgtcagcttccatcctgaactgcctatcattatcacaggctcagaagat
ggaactgtgcgcatttggcattccagcacttaccgcctggaaagtaccctcaactatggt
atggagagagtgtggtgtgtggccagtttaagaggatccaataacgtggctctgggatat
gatgaaggcagcattattgttaagcttggtcgtgaagaacctgccatgtccatggatgca
aatggaaaaattatttgggctaaacattccgaagtccaacaggctaacttgaaagctatg
ggagatgctgaaatcaaagatggagaaagattgcccctggctgtaaaggatatggggagc
tgtgaaatctatcctcagacaattcagcacaaccctaatggacggtttgtagtagtgtgt
ggtgatggtgaatacatcatctacacagctatggctttgagaaacaagagctttggttct
gcacaggagtttgtatgggcacatgattcttcagaatatgccatcagggagagcaacagc
gttgtaaagatatttaaaaatttcaaagagaagaagtcattcaaacctgattttggagca
gaaggtatctatggtggcttcctgttgggcgtcagatctgttaatggtttggcattctat
gactgggaaaacaccgaactgattcgcagaattgaaattcagcccaaacatattttctgg
tctgactcgggtgagcttgtctgcattgctacagaagagtcgttcttcattctgaaatac
ctatcagaaaaagttgcagcagcacaagaaacacatgaaggggtcactgaagatggaatt
gaagatgcttttgaggttcttggtgagattcaggagattgtgaagacaggcttgtgggta
ggcgactgctttatttacaccagttctgtgaacaggctcaactactatgttggaggagaa
attgtcacgattgcccatttagacaggacaatgtatcttttgggatatatccctaaggac
aaccgactttatttgggagataaagagctaaacattgtgagctactctttgctggtctca
gtgcttgagtatcaaactgctgtgatgagaagagatttcggtatggctgataaagttctt
cccacgattccaaaagaacagagaaccagagttgcacattttcttgaaaaacagggcttc
aaacaacaagctcttgcagtatctacagatccagagcatcgctttgaacttgctcttcaa
cttggagaattaaaaatagcctatcagcttgcagtggaagcagagtcggaacagaaatgg
aagcaacttgctgagcttgccattagtaaatgccagtttggcttagcccaggagtgtctc
caccatgcacaagactacggaggacttctgctcctggctacagcttcaggaaatgctaac
atggtgaataagttagctgaaggagcagaaaaagatggcaagaacaatgttgcatttatg
agctacttcctgcagggaaagctggattcatgtttagaactcctgattaaaactggacgt
ctccccgaagctgcttttcttgcacggacatatttgccaagccaagtttcaagggttgtt
aaattgtggcgggagagtctctctaaagtaaatcaaaaagctgccgagtcccttgctgat
cctacagaatatgaaaatcttttccctggattaaaggaagcttttgttgctgaagagtat
gttaaacaaagtcttgcagacttgcgaccagcccgggaatacccccttgtcactccaaat
gaagaaagaaacttacttgaagaagcaaaaggctttgagccttctggagtaacagcacct
caggtcagtgctgaagaaaagtttccatctcctaaacaagaaatgaaaacagttctgcag
aattctgatccacttccaacaaaagatcaaaagacacttctggatttggaagatgactta
gataacttggatctggaggatattgatactacagatatcaatctggatgaagaaatctta
gatgagtga

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