Chaetura pelagica (chimney swift): 104395669
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Entry
104395669 CDS
T08631
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104395669 (DDX4)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104395669 (DDX4)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104395669 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SNF2-rel_dom
ResIII
P-loop_SecA
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-GeneID:
104395669
NCBI-ProteinID:
XP_010003701
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MNQEDWNAEMGDEESSVLPALEQARFPGRPNGPSSDFTSSIGSFGAVERHRQDHFGGYSR
SRGFKEGDAIEDSTQNRGFRGFPSGFGQKESIKVEQRDRPQSGILLDSRGRRPFGDRTAA
YKERSEEIDSERGPKVTYVPPPPPDDEQSIFAHYQTGINFDKYDENVVQVSGLDPPAPLQ
DFETANLCQTLNVNIAKAGYSKLTPVQKYSMPIILAGRDLMACAQTGSGKTAAFLLPIVA
HMMRSGVTASSFKEQQEPECLIIAPTRELVNQIFLEARKFVYGTCIRPVVIYGGTQTGHS
IRQIMQGCNILCATPGRLLDVIRREKIGLCNVQYLVLDEADRMLDMGFGMDMKNLISFPN
MPPKNKRQTLMFSATFPEEVQRLAGEFLKPDYLFVVVGRVGGACSDVQQSVLQVSQYSRR
DKLVEILQSIGHERTMVFVDKKKKADYIAAFLCQENIPATSIHGDREQKEREIALHDFRS
GKCPVLVATSVAARGLDIENVKHVINFDLPSTIEDYVHRIGRTGRCGNTGKAVSFFDDSS
DGHLAQSLVKVLSDAQQEVPVWLEEIAFGFQGERAFTSFSTQKNYRGRGGMNAGRMKMPY
SASESESWD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggaggactggaatgcagaaatgggggacgaggagtcatcagttcttcctgcc
cttgagcaggctaggttccctggaagaccaaatggcccttcgtctgacttcacttcaagt
ataggctcatttggtgctgttgaaagacataggcaggatcactttggagggtattccagg
agtagaggtttcaaagaaggggatgctatagaagattctacacaaaatagaggttttaga
ggatttcctagtggctttggacaaaaagagagtattaaagttgagcaaagagacagacca
cagtctggcattcttcttgactctcgaggaagacgaccatttggagatcgtacagcagct
tacaaagaacgcagtgaagaaatagattctgaaagaggtccaaaggtgacttacgtgccc
cctcctccacctgatgatgagcaatccatctttgcacattatcagacaggaattaatttt
gacaagtatgatgaaaatgttgttcaagtgtcaggacttgaccctccagcaccattacag
gattttgaaacagctaacctctgccagactttaaacgtgaacattgctaaagctggatac
tctaaacttactccagtgcagaagtatagcatgcctattatactggcagggcgggattta
atggcgtgtgcccagacaggatcgggaaaaactgcagcttttcttctaccaattgtggcc
catatgatgaggagtggtgtaactgccagcagctttaaagagcagcaagagccagaatgt
ctcattattgccccaactagagaactcgtaaatcaaatcttcctagaagcaagaaaattt
gtgtatggaacttgtataaggcctgttgtgatctatggaggtacacaaacaggccattca
attcgtcagataatgcaaggctgcaatatactatgtgccactccaggaagacttctggac
gtcattagaagagagaagatcggtttgtgtaacgtgcagtacttggtgctagatgaagcg
gaccgcatgcttgatatgggtttcgggatggatatgaagaatctgatttctttcccaaac
atgccaccaaaaaacaaacgtcaaacactcatgtttagtgccacttttcctgaggaagtt
cagaggctggctggcgaatttttgaaacctgattatttatttgttgttgttggacgtgtg
ggtggagcttgcagtgatgttcagcaaagtgttcttcaagtttctcagtattccaggagg
gataaactggtagaaattctacaaagcataggtcacgagcgaaccatggtgtttgtggac
aaaaagaaaaaagctgactacatcgcagcctttctttgtcaagaaaacataccagccact
agcatccacggagatagagaacagaaagagagagaaatagctcttcatgattttcgttca
ggaaaatgtccagttcttgtggcaacttcagtggcagcaagaggtctggatattgaaaac
gttaaacatgttattaattttgatcttccatccaccattgaagattatgtacatcgaatt
ggacgaactggtcgttgtggcaatacaggaaaagcagtttccttctttgatgacagttca
gatggtcaccttgctcagtctctagttaaagtgctttcagatgcccagcaagaagttcct
gtttggttggaagaaattgcttttggttttcaaggagaaagagcatttacatcatttagt
acccaaaagaattacagaggcagaggcggcatgaatgcaggaagaatgaagatgccatat
tctgcaagtgaatctgagtcatgggattaa
DBGET
integrated database retrieval system
