KEGG   Chaetura pelagica (chimney swift): 104395823
Entry
104395823         CDS       T08631                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-associated protein 2-like
  KO
K26545  ubiquitin-associated protein 2
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpea04121]
    104395823
   03400 DNA repair and recombination proteins [BR:cpea03400]
    104395823
Ubiquitin system [BR:cpea04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    104395823
DNA repair and recombination proteins [BR:cpea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     104395823
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA CUE DUF1510
Other DBs
NCBI-GeneID: 104395823
NCBI-ProteinID: XP_010003870
LinkDB
Position
Unknown
AA seq 1127 aa
MMTSAGSERIRGTRDKMHISTTQPTQPQKQVLQATAEQIRLAQMIYDKNDADFEDKVKQL
MEVTGKNQDECIVALHDCNGDVNRAINILLEGSSDTTSWETVGGKKKSLGKESSENKGDR
EVSRGRGSSNRRGRGGSRGREFKVEENGVDNNQGDKPSDRGKRGRGRGFGRGRGRGAGRF
SAQGMGTFNPADYMESSATDGFGTKSEIWETGQNDADDGTGPQSRCXLAQDLPKSFGFQG
AWKNSIEEWTAEDWNEDLSETKVFIASSVPAENRVTPGQSIDLVTLLQKPVTSTQETEGN
SFEAPQQQTFGQALVFTNSQHSTQMASGTGSSSAASSYSPQSLSAALCSGFGELGSSKLE
NSTGSQILDQLKSPGLGQFTSQQNNSSSTTTTTTTTSSWDLNLPIAQSSVLSQFDFKSQP
EPSPVLSQLTQRQQRQTQAVPVPPPGLESFSSQVKLHEPSPVDTSTAVTKMLQLPTISVD
NQTATAHQTQQKQIKPPKRRITPASKIPASAVEMPGSADMTGLNVQFGALEFGSEPALPE
FGSTSSSENTSQATNNSLYSKSVNDPLNTSLPISNKVQESTYTTSAITSSSLTCSSQSTS
PVKTSSYDQTSVHSGIAYQSSMAPSESTLVAVMNGHSSVRTQATLDTTSSVPAPKTEPSP
SLPSAGSLPSMVSTTASLLPSASQHPATLPSLPQSSDLASSSLSQLSSSLSNHQGSLSPA
SVLSSSTSHAHTSVENTTSLQPSTTFSTVSTSATNTTSSVVSMTSSMNTTNSLGLSVTSV
SIPAATTRAAPLVSSGKAPPNLPQGVPPLLHNQYIVGPGGLLPAYPIYGYDDLQMLQSRL
PMDYYGITFPAPATLTGRDGSLANNLYSGDVTKFGRGDSASPAPATTLTQPQQNQTQTHH
TTQQPFLNPTLPPGYSYTGLPYYAGVPGVPSAFQYGPTMFVPPASAKQHGVNLNTVSTPF
QQASSYGQHSYGAGYDDLTQGTAAGDYSKGGYSGSSQAQNKSASTGPGKGVSVTSSNTGV
PDISGSVYNKTQTFDKQGFHPGTPPPFSLPSALGSTGPLNPGAAPGYAPAPFLHILPAHQ
QPHSQMLHHHLQQDGQGGSGQRNQPSTMQQKSQTTKTTYGTSPYWTN
NT seq 3384 nt   +upstreamnt  +downstreamnt
atgatgacttcggcgggcagtgaacgtattcggggcactcgggacaaaatgcatatttca
accacacagccaacacaaccacagaaacaagtactacaggcaacagcagagcagattcgc
cttgctcagatgatctacgataagaatgacgcagattttgaagataaagtgaaacaactt
atggaagtgacggggaaaaaccaggatgagtgcatagtggcactacatgattgtaatggg
gatgtgaacagagcaatcaacatactgctggaaggaagttcagacacgacttcttgggag
actgtagggggaaagaagaaaagccttggaaaggaaagttcagaaaacaaaggggacaga
gaagtgagtcgtggacgtggaagttccaacagacgaggaagaggaggcagccgtggccga
gagtttaaagtcgaagagaatggagtggacaacaatcaaggagacaagccttcagaccgt
gggaaacgtggacgtgggagagggtttggacgcggcagagggagaggagcggggaggttt
tcagcccaaggcatggggacatttaaccctgcagactatatggagtcttctgccactgat
ggctttgggacaaaatcagagatttgggagactggtcagaatgatgcagatgatggaact
ggcccacagagcagatgttaacttgctcaggacctgccaaaaagttttggattccaagga
gcatggaaaaactcaatagaagaatggacagcagaagactggaatgaagatctttctgaa
acaaaagtcttcattgcttcctctgttccagctgagaatcgtgtgactcctgggcaaagc
attgatttggtaacactgcttcaaaagcctgtgacttctacccaagagacagaaggtaac
tcatttgaggctcctcagcagcagacctttggccaagccctagtcttcacaaattctcag
cacagcacccagatggcatcaggaactggcagctccagtgctgcaagctcttattctcct
caaagtctgtctgcggctctttgttctggctttggagaacttggatcctctaaattggaa
aactctactggatcccaaatcttggaccaattgaaatctccaggtttgggtcagtttact
tctcaacaaaacaatagtagctctaccaccactaccacaactactacatcatcctgggat
ctaaatctgcccattgctcagtcctcagtccttagtcagtttgactttaaatcccagcct
gagccatccccagttctgagccagctgacccagcgacagcaacgacaaacacaggcagtc
cctgttcctcctcctgggctggagtctttctcctcccaggtaaaactccacgagccatca
ccagttgacacctctacagctgttaccaaaatgttacagctccccactatatctgtggat
aaccagacagcaactgcccatcaaacccagcagaaacagataaaaccaccaaaacggagg
ataactccagcatccaagattcctgcctctgcagtggagatgcctggatcagcagatatg
acagggttaaatgttcaatttggagctctggagtttggatcagagcctgcactcccagag
tttggatcaacttcaagcagtgagaataccagccaggcaaccaacaatagcttgtactca
aaatctgtaaatgatcctttgaatacctctttgccaatatccaataaggtacaggagtcc
acctacacaacctctgccatcacctcttcaagtctgacctgctcatcccagagcactagc
ccagtaaaaacttcctcctatgatcagacttctgtacatagcgggatagcataccaaagc
tccatggctccgtctgagtcaacccttgttgcagttatgaacgggcacagcagcgttaga
acacaggcaactcttgacactacttcatcagttccagcgcctaagacagagccttctcct
tcactaccttctgctggttctctgcctagcatggtatccaccacagcttcacttctgcct
tcagcatcacagcacccagcaacgttgcccagcttgcctcagtccagtgatttggccagc
agctcactttctcagttaagcagctccctttccaatcatcagggcagcctctcccctgcc
tcagtgttgtcttcaagcacatcacatgcacacactagtgttgagaacacaacttcactc
cagccctcaacaaccttttcaaccgtttcaacctcagccactaacaccacctcttctgtt
gtcagcatgacaagcagtatgaacactacaaacagccttggcctgagcgttaccagtgtg
tctataccagctgctaccacacgggcagctcctttagtgtcttcagggaaggctccccca
aacctgccccaaggtgtacctcccctgttgcataaccagtatattgtgggacctggagga
cttctgcctgcctacccaatatatggttatgatgatctccagatgcttcaatccaggctg
ccaatggattactatggaattacattccctgctcctgcaaccttgacaggcagagatggg
agccttgctaacaacctgtactcaggtgatgtaacaaaatttggccgtggagattctgcc
tctcctgctcctgctaccacactcacccagccacagcagaaccagacacagactcatcat
acaactcagcagcccttcctcaacccaactctgcccccaggatacagctacactgggtta
ccttattatgctggtgtgcccggtgtacccagtgcattccagtatgggccaaccatgttt
gtacctccagcatctgctaaacagcatggagtcaacctgaacacagtgtcgactcctttc
cagcaagcaagcagctatgggcagcacagctatggagcaggctatgatgacttaacgcag
gggacagcagctggagattacagcaaaggaggctacagtgggtcatctcaagcacaaaac
aaatctgctagcactggacctgggaaaggagtttctgtgacctcaagtaacacaggtgta
cctgatatcagtggctcagtctataacaagactcagacatttgacaagcagggattccat
cctggtacaccacctcctttcagcctgccctctgctcttggatcgactgggcccctgaac
cctggtgctgccccaggttatgctccagccccatttctccatatcctgcctgcgcatcag
cagcctcattcccagatgctacatcaccatcttcagcaagatggacagggtggatctggc
caacgcaaccaacccagcaccatgcagcaaaagtctcagactaccaaaaccacctatggc
acttctccatactggacaaactaa

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