Chaetura pelagica (chimney swift): 104395847
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Entry
104395847 CDS
T08631
Symbol
MBD5
Name
(RefSeq) LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 5
KO
K23219
methyl-CpG-binding domain protein 5
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104395847 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104395847 (MBD5)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
104395847 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
104395847 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
104395847
NCBI-ProteinID:
XP_010003893
LinkDB
All DBs
Position
Unknown
AA seq
1731 aa
AA seq
DB search
MNGGKECDGGDTDGGPPAVQVPVGWQRRVDQSGVLYISPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLVLPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTSATPVVPTRAATPRSLRNKSHEGITNSVMPECKTPFKLMIGASNAMGR
LYVQEIAGSQQQELHSVYPRQRLGSNELGQKSPYRGSHGGMPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPNFHGAPNSSPIHMTRTPLSPPSVMLHGSPIQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSAGMEIPRAMFHHKPPQGPPPPPPPPSCALQKKPLTSEKDPLG
ILDPIPSKPVNQNPVIINPTTFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPGHMNH
GSHVQRVQHSASTSLSPSPVTSPVHMMGSGIGRIEASPQRSRSSSTSSDHGNFLLPPVGP
QSSCTGIKVPPRSPRSTIGSPRPSMPSSPSTKHDGLNQYKDIPNPLIAGMSNVLNPPNNA
VFSTASAGSGSLKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNN
NSSSNSGPVASGGNNEGHSTLNTMFPPAANVLLPTTEGQSGRAALRDKLMSQQKDPLRKR
KQPTTTVLSLLRQSQLDSSGVSKAGSDLIRKQSQSSFPISSMSQLLQSMSCQSSHMSSNS
TSSCGSSNTALPCSGNQMHFADTSMNSGSLQNSLAQSLPLRGEGVHCQNTNTNFGHGTSP
GTTNHLAGLINQMQASGNCGMLSQSGMALGNSLHPNPPQSRIQASSTPVIPNSIVSSCNQ
TSPEAGASGPSSSIAIAGTSQPAITKTTSVLQDGVIVTTAAGNPLQSQLPIGSDFPFAGH
EHSLHFPQNSSSNNNLPHSLNQNLLNSLPISLPVNQQHLLNQNXSRSLLGSKSSADCNPL
GFLNPNVNAALAFLSSDVDGQVLQPVHFQLLATLLQNQAQAAAMLPLPSFNLTISDLLQQ
QNNPLPSVTQLTAPPDHLPSNQSESTRVDTLLTNPLGNPLPSFSGTDTTSNPLLLPAVSG
ASALMALNPQLVGGVLNSASGNTANHPEVSIATSSQATTTTTTTSSAVAALSVSTLGGGT
AVVSMAETLLNISNSAGNPSSPAKLNNNSVVPQLLNPLLGTGLLGDMSSLNTTLNNHQLS
HLQSLLNNNQMFPANQQQQQHLLQGYQNMQGFQGQPPIPGPANNPNPMACLFQNFQVRMQ
EDAAVLNKRMITQMGMAPVPESSNAALPAFQEPSCDLQPRTEPSLGQQAKDNLTVAAQGD
TSVDAIYKAVVDAASKGMQVVITTAVSSTTQMSPIPALSAMSAFTASIGDPLNLSSAVSA
VIHGRNVGVSDHEGRIRNTRGTRILKNSEHGKNSSEGDGYEYYKSTSCNTPKKQWEGEQS
PVSEINRWKCDEFLDHSAHIHSSPCHERPNNISTLPLLQGEQHQILLSQRNCQSDKMLEE
NFRYNNYKRTMMSFKERLENTVERCAHINGNRPQQNRGFGELLNTSKQDLVLEEQSPSSS
NSLESSLVKDYIHYNGDFNAKSINGCVPSPSDAKSISSEDDLRNPDSPSNELIHYRPRTF
NVGDLVWGQIKGLTSWPGKLVREEEVHNSCQQNAEEGKVEPEKLKTLTEGLEAYNRARKR
NRKSGKLNNHLEAAIHEAMSELDKMSGNVHQIPQGDRQVKPPKPKRRKISR
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtggaaaggagtgtgacggaggggacacggatggagggccaccagcagtgcaa
gttcccgttggttggcagcgacgggtggaccaaagtggagtgctctatatcagtcccagt
gggtctttattatcctgcttggagcaggtgaagacttacttgctgactgatggaacatgc
aagtgtggcctagaatgtcctcttgttcttcccaaggtctttaattttgatcctggagct
gctgtgaagcagagaactgctgaagatgtcaaagcagacgaagatgtcaccaaactatgc
atacataaaaggaaaattattgctgtggctacacttcataaaagcatggaagcaccacat
ccttcactggttctcactagtcctggtggtggaacaagtgcaactccagtagttcctact
cgagcagcaactccacgatcactgaggaataaatcacatgaaggaattacaaattctgtg
atgccagaatgtaagactcctttcaagttgatgataggggcatctaatgccatgggtagg
ctttatgtgcaagaaatagctggaagccagcaacaagaacttcattctgtctatcctagg
cagagattgggtagtaatgaacttggacagaagtctccgtatcgtggcagtcatggtggg
atgcccagtccagcttcatcaggatcacaaatatacggagatggctcaatctctcctagg
actgacccacttggaagccctgatgttttcacaaggaacaatcccaattttcatggagcg
cccaactctagtcctattcacatgaccaggacacctctgtctccaccatcagtaatgtta
catggttctcccatacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgaccacaaaaagcccagtaatgaaaaaacccatgtgtaacttttcagctggt
atggaaataccacgagcaatgtttcaccataaacctccccaaggtccacccccacctcct
ccaccaccttcttgtgctcttcagaaaaagccattaacatcagaaaaagatccacttggc
atacttgatcctattcccagcaaaccagtgaatcagaatcctgttatcattaacccaact
actttccattcaaatgtccactctcaggtacctgtgatgaatgtaagcatgcctcctgct
gtcgtccctttgccaagtaatctccctttgccaactgtaaaacctggtcacatgaaccat
ggaagtcatgttcaaagagttcagcattctgcttcaacttccctctctccttcaccagtg
acatccccagttcacatgatgggatccgggattggaaggatcgaggcttctccccaaaga
tcacgttcttcttccacgtcatcagatcatggaaatttcctgctgcctccagtaggacca
cagtcatcctgtactggtattaaagttcctcccaggtccccaaggtcaacaatagggtca
ccgagaccatctatgccatctagcccttccaccaagcacgatggacttaatcaatacaag
gacatccctaacccattaattgctggaatgagtaatgtattaaatcctcccaacaatgca
gttttttctactgcatcagctggaagtggttccttgaagagtcagcctggtttgctggga
atgcctttaaatcagatcttgaaccagcacaatgctgcctcttttccagcaagcagttta
ctctcagcagcagccaaagcacagctagcaaatcaaaataaacttgctggtaacaacaat
aacagcagtagcaattctggacctgttgccagcggtggcaacaacgaaggacatagcact
ttaaataccatgttccctcctgctgccaacgtgctcctaccaacgactgaagggcaaagt
ggccgagcagcactgagagataaattaatgtctcagcaaaaagatcctctgagaaaaaga
aagcagcccaccaccacggtgttgagtttgctgagacagtctcagttggacagttctgga
gtttccaaagctggatcggatttgataagaaagcaaagtcaaagctcctttcccatcagt
tctatgtcccagctacttcagtccatgagttgtcaaagctctcacatgagcagcaatagt
accagcagttgtgggagctcaaatactgctctaccttgctctggtaaccagatgcatttt
gcagataccagtatgaactctggcagtctccagaactcgctggcacagagtttacccctg
cgaggggagggtgtgcactgccagaacacaaacactaattttggccatggcactagcccg
ggcacaaccaaccatcttgcaggtttaataaatcagatgcaggctagtgggaactgtggg
atgctcagtcagtcaggaatggctttaggaaattcattacatccgaacccacctcagtcg
agaatccaggcatcctccactccagtgataccaaacagcattgttagcagctgtaatcaa
acaagtcctgaagcaggggcttcaggaccatcatcatcgatagccatagctggcaccagc
caacctgccatcacaaagacaacatctgtgcttcaagatggtgttatagtcactactgca
gctggaaacccacttcagagccagctgcccatcgggagcgatttccctttcgctggccac
gaacactcgcttcattttccgcagaacagctcttcaaacaacaatcttccacattctttg
aatcaaaacctcctcaattctcttcctatctctttgccagtgaatcagcaacatctccta
aaccagaatncatcgcgatccctactgggatcaaagtcttcagctgactgcaacccttta
ggttttctcaacccaaatgtaaatgctgctttagcttttctctccagtgacgtggatggg
caggtattacagcctgttcattttcagcttctagcaaccctccttcagaatcaagcccaa
gcagctgccatgcttcccctaccatctttcaatctgaccatctcagatttgttgcagcag
caaaataaccctttaccctcagtaacacaactgacagccccacctgaccatttgccaagc
aatcagtcagaaagcaccagggtggacaccctgttaaccaaccccctgggcaacccttta
ccaagcttttcaggcactgacactacttccaaccccctgctcctcccagctgtctctggg
gcctcagcattaatggccttgaatccccagctggtgggaggtgtcctgaactccgcatcg
ggcaacaccgctaatcatccagaggtttccattgccacctcctcccaagcaaccactacc
acaaccactacatcatcagcagtggcagcactgtctgtctccaccctgggtggtgggaca
gcagtggtgtcaatggcagaaacattgctgaacatatctaatagtgctgggaatccatct
agtccagctaaactcaacaataactctgtggtgccacagctacttaaccctctactgggg
acaggtctgcttggtgacatgtcatctttaaacactactttgaataaccatcagctgagt
catctccagtcgctattaaacaataatcagatgtttcctgcaaatcagcagcagcagcag
caccttctccaggggtaccagaacatgcagggctttcaaggccagcccccaattcctggc
ccagctaacaacccaaaccccatggcatgtctgttccagaatttccaggtgagaatgcag
gaagacgctgctgtcctcaacaaaagaatgatcactcaaatgggaatggcaccagttcct
gagagctccaacgctgcgcttccagctttccaagaaccatcttgtgatttgcagccaaga
actgaaccatctcttggacaacaggcaaaggataacctcactgttgctgctcagggtgac
acatcggtggacgctatctacaaagcggttgtagatgctgcaagcaaagggatgcaagta
gtcatcaccactgctgttagcagtaccacacaaatgagtcccattccagctttgagtgcc
atgagtgccttcacagcctcaattggtgacccattaaatctttctagtgctgtcagtgca
gtaatccatggaagaaacgttggggtttctgatcacgaaggtaggataaggaacaccaga
ggaacgcggatactgaagaactcagagcacggtaaaaactcaagtgaaggggatgggtat
gaatattacaaatcaacaagttgtaacacgcccaaaaaacagtgggaaggggagcaaagt
cctgtcagtgagataaataggtggaaatgtgatgagtttctagaccactctgcccatatc
catagtagtccttgtcacgaaaggcccaacaacatctccacactgccactgttgcaaggc
gagcagcatcagatactgttgtcacagcgaaactgtcagagtgacaaaatgttggaggag
aatttcaggtataacaattacaaaagaactatgatgagttttaaggagaggctggagaac
actgtggaacgatgtgcacacatcaacggaaacaggcctcagcagaacagagggtttggg
gagttgctgaacacttctaaacaagacctggttctggaagagcaatctccaagttcctca
aatagcttggaaagttctttagttaaagactatatccattacaatggagattttaatgcc
aaaagcattaatgggtgtgtgcctagcccttcagatgctaaaagcatcagtagtgaagat
gacctaaggaacccagactccccttcaaatgagctgattcattacaggccgaggacgttt
aatgttggcgacttggtctggggccaaatcaaaggactgacttcatggcctggcaagcta
gtaagagaagaagaagttcacaattcatgtcaacaaaacgctgaggaggggaaggtggag
ccagagaagttgaagacactaacagaaggtctagaagcttacaaccgagccaggaaaagg
aacagaaaaagtggaaagctaaataaccatttagaagctgctatacacgaggccatgagt
gaactagacaaaatgtctgggaatgtccaccaaatcccacagggagacagacaagtgaag
cctccaaaacccaagaggaggaagatctctagataa
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integrated database retrieval system
