Chaetura pelagica (chimney swift): 104395890
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Entry
104395890 CDS
T08631
Symbol
PAN3
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104395890 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104395890 (PAN3)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104395890 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
104395890 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
104395890
NCBI-ProteinID:
XP_010003939
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MMQRMTNSSSSPSLLNDSAKQYAGHDPLTSPNSSLFNDFAALSVSQRRKLAKPAFPSFIT
DLEDRYNTVLPRKYRLGMLDERIVPVGSKARKSKNPIGCLADRCKTGVPINMVWWNRVTE
NNLQTPNPSASEFIPKGGSTSRLSNVSQSSMSAFSQALFSHPSMGGPATAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASASVANAVSQPPSTGQVIQKETVG
GTTYFYTDTTPAPLTGMVFPNYHIYHPAAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADIPAVPAEVDSYHSLFPLEPLPPPNRIQKTSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACR
VMDPTKILVTGKTRLRVNCVGIFDVLTFDNSQNNPLALMAQFQQADLISLGKVVLALACN
SLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaggatgacaaatagcagcagctcccctagccttctcaatgacagtgccaag
cagtatgcaggccatgatccactaacttcaccaaattcatccttgtttaatgactttgct
gctctgagcgtgtctcaaaggaggaagctggcaaaaccagcatttccttcatttatcact
gacttggaggacagatacaatacagtcttgcccaggaagtaccgactgggaatgctggat
gagaggatagttccggtgggatcaaaagcaagaaaatcaaagaaccctattggctgtctg
gctgacaggtgtaaaacaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatccttctgcaagtgagtttattcctaaaggaggatcaacc
tccaggctgagtaatgtatcccagtcaagtatgtctgccttctctcaagccttgttctct
cacccctctatgggaggtcctgctactgctgggctagcaccaggtatgtcactatctgca
ggatcttctcctcttcattcccccaaaataactccacatacatctcctgctcctcgaaga
agaagtcatactcctaacccagcaaactatatggtgcctactagtgcctctgcttctgtt
gctaatgctgtctctcagcctccatctactggccaggtgattcagaaggaaacagtgggt
ggaacaacatacttctacactgatacaactccagcacctctcacaggaatggtgtttcca
aactaccacatttaccatccagctgcacctcatgttgcttacatgcagccaaaggcaaat
gcaccttccttcttcatggcagatgagctcagacaggaactgattaacagacacttaata
actatggcccagattgatcaggccgatattcctgcagttcctgcggaagtggacagctac
cacagcctctttcccttggaaccactgccacctcccaatcggatacagaaaacaagcaac
tttgggtacattacatcatgctataaagctgtaaatagcaaagatgacctgccatattgc
cttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtattggttgacatg
tggaaaaaaattcagcactcaaatatagtcaccttgcgtgaagtgtttaccactaaagca
tttggagaacattctcttgtgtttgcatatgattttcacgctggaggagagaccatgatg
agcagacacttcaatgaccctagtgctgatgcctacttcacaaaacgaaaatggggtcag
catgatggacctctaccacggcagcatgctggattacttccagagtctttgatatgggca
tatattgtgcagctcagctctgccttacggaccattcatacagcaggactggcgtgccga
gtcatggatccaaccaagattctagtaacaggcaaaacaaggttacgagttaattgtgtt
ggaatctttgatgttttaacatttgacaacagtcaaaacaatccactggcactaatggct
cagtttcagcaagcagatctgatctccctggggaaagttgtgttggctttggcttgcaat
tctttatcaggaattcagagagagaatttgcagaaagcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatttgctgactgaccaaaacaggcttcgc
agtgtaaatgatatcatgcctatgattggtgcacgattctatactcagttggatgctgct
cagatgcgaaatgatgtaatagaggaagaccttgcaaaggaggtgcaaaatggaaggttg
tttaggcttctagcaaaattgggaacaatcaatgagaggccagagtttcagaaagaccca
acgtggtcagaaactggagacaggtatttactaaagctctttcgagatcaccttttccat
caggtgacagaagcgggtactccttggattgacctcagtcacattatctcatgtcttaac
aagttagatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgta
cttgtggtaacttacagcgatttaaaacgctgctttgaaaatacttttcaagaactgatt
gcagccgcaaatggtcagttgtag
DBGET
integrated database retrieval system
