Chaetura pelagica (chimney swift): 104396004
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Entry
104396004 CDS
T08631
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpea03000
]
104396004 (PRDM4)
Transcription factors [BR:
cpea03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104396004 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
104396004
NCBI-ProteinID:
XP_010004086
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MNEMNLSPVGMDQLTSSSVSNALPVSGGHLGLAASPTHNAIPAPGLPVAIPNLGPSLSSL
PSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRPPPQY
IHPNTINVDSNPALSVSSNPSALDPYQPSGTVGLEPGIVSMDSRTVNTHGTQNLHPSDSH
EVALDTTITMESVSRVTSPISPDGMTEELTMDDVAGDHSQIPNGSQSHEPLSVDTVGGNL
TSDAVGHGGVIPIHGSTLELPVVMEPDHMAGRVTGISDNTLNDSIHTVAMSTNSVSVALS
TSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPSHVDVSADNLAFVPSSLQMEDSNS
NKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSIMGAE
AGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHSGVLEFCIITTDENEC
NWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRDYARQLGVPEHPDV
HICHCGKECASYADFKAHLSSHIHNHLPSQGHSSSHGPGHGKERKWKCSMCPQAFISPSK
LHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAHLESH
MVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLRTNHLKKHLNSH
EGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEDESEEELIDSMRTEDCR
INNGVYSTGDALSGHK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgaacttgagtcctgtggggatggaccagctgacctcatcctctgtgagc
aatgccttgccagtctccgggggtcacttgggattggcagcctcacccactcacaacgcc
ataccagcaccaggcttgcctgttgcaattccaaacttgggcccctccttgagttccttg
ccctctgctctgtctctgatgctcccaatgggtattggggatcgaggagtgatgtgtggt
ataccagagagaaactacaccctacctccaccaccataccctcacctggagagcagctat
ttcagacacattctacctggtatcttatcttacttggctgacagacctccacctcagtac
atccatcccaacactattaatgttgacagcaatccggcattgtcagtctccagcaatccc
tctgccctcgatccctaccagcccagtggaactgtagggctggaaccagggattgtctcc
atggactcccgcacagtgaacacgcatggcactcaaaatcttcatcctagtgatagccac
gaggtagcactggatactacaatcactatggagagtgtttcgagggtaaccagccccatc
tctccagatgggatgacagaagagcttacgatggatgatgtagccggggatcattcgcag
atcccaaatggctcccagagccatgaacctttatctgtagacacagtgggaggtaacttg
acatcggacgctgtgggacacggcggtgtcattcccattcacggtagcactttggaactc
cctgtcgtcatggagcccgaccacatggctgggcgggtgacaggaatttcggacaacaca
ctaaatgactccattcatactgtggccatgagcaccaactctgtgagtgtggcgctctct
acctcacacaacctagcttctctggactcggtagccttgcacgaagttggcctcagcctc
gagccggtggcagtgtcttccataaatcaggaagtagccatggggccaagtcacgtggac
gtgtctgcagacaatcttgccttcgtaccatcctctctgcaaatggaagactccaattcg
aacaaggagaacatggcaaccttgtttaccatctggtgcacactgtgtgacaaggcatat
ccatcagactgcccagatcatggccccgtcacctttgtccctgacaccccgatagagagc
cgagccaggctttctctccctaagcagcttgtcctccggcagtctatcatgggagctgaa
gcgggtgtgtggacacgagaaaccattcctgtaaggacttgttttggacctttgatcggg
cagcagagccattctctggaggtggctgactggacagacaaagcagccagtcacatctgg
aagatctatcacagtggtgtcctggagttctgcatcattacaactgatgaaaatgaatgc
aactggatgatgtttgtacgtaaagccaggaaccgggaagagcagaacctggtagcttat
cctcatgatggaaaaatctacttttgcacctctcgggacatcccacctgaacacgagctc
ctcttttattacagtcgggactatgctcgacagcttggtgtccctgaacatccggacgtg
cacatctgccactgcggaaaggaatgcgcttcctatgcggacttcaaggcccatttgagc
agccatattcacaaccacctccccagccaggggcacagcagcagccatgggccaggccac
ggcaaggaaaggaagtggaaatgctccatgtgcccccaggctttcatctccccttccaag
ctccacgtccacttcatggggcacatgggcatgaagccgcataagtgcgatttctgtagc
aaagctttcagtgatcctagcaacttacggacacacctcaagatacatacaggccagaag
aattaccgctgtaccctctgcgacaagtcgttcactcagaaggctcacctggaatcacac
atggtcatccacacgggggagaagaatctgaagtgtgactactgtgaaaagctgttcatg
cggaggcaggacctcaagcagcatgtactcactcacacgcaagaacggcagatcaagtgc
cccaagtgtgacaagctgtttctgaggacaaatcacctgaagaagcatctcaattcacat
gaaggaaagagggactatgtctgtgaaaaatgctccaaggcttatctaaccaagtatcat
ctcactcgccacttaaaaatatgtaaaggccccacatccagcctgtcagccccagaggag
gaagaagaggatgagtcagaggaggaattaatagactctatgaggactgaagactgtagg
attaacaatggagtctactccacaggtgatgccctctctggacacaaatga
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