Chaetura pelagica (chimney swift): 104396197
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Entry
104396197 CDS
T08631
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104396197
Ion channels [BR:
cpea04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104396197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
104396197
NCBI-ProteinID:
XP_010004316
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MAEFSLPGTNNFRKFTRKSLAAIEKRIAAKKDCQRNTTDHRPEEKPRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYDDHKVFIVLNKQKTIFRFTATSALWILSPFHPIRRAAIK
ILVHLAFTFFIICTIITNCVFMALAESYRNSSSWNKYIEYTFTGIYTFESLIKILARGFC
LNEFTFLRDPWNWLDFSVIVMAYLGAVSDLGSVSALRTFRVLRALKTISVVPGLKIIVGA
LIQSVKKLSDVMILTVFCLCVFALIGLQLFKGNLRYKCIRNSTESLNVFRNPNKTWESYE
SFQNYTAHFAKKGGTSDILLCGTAAGTCPSDYVCKKIGPNPDYGFTSFDTFGWAFLSLFR
LMTQDYWERLYQQTLRASGKVYMLFFMLVIFLGSFYLVNLILAVVTMAYEDQNKATIAET
EAKERKFREAMELIQKEQEALAMKGVDVSSICSFDTVSLSTKEIKERSNRKKRNKSLGIE
DNEDQQFSNSQSTDIQRKLPAVNDERSMMPLPPRLSVEYINEALQRQRAASAVSIITSVL
EELEESQRRCPRFLSDFAFKYLIWDCCPLWLRIKKKVTAFIKDPFTDLTITLCIVMNTLF
MALEHDNMSPDFKMMLKVGNLVFTGIFTAEMILKIIALDPYYYFQQPWNIFDSVIVTLSL
IELSLPRDKSRKKSKKGGTLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSMGALSNLTL
VLAIIVFIFAIVGVQLFGKSYGEKRFKIDKEGQPRWHMMDFFHSFLVVFRILCGEWIETM
WDCMVVAEPSLCLLVFLLVMVLGNLVVLNLFIALLLNSFSADSLQTAEDDRELNNLRIAF
ARIHKGFHFVKSVTWDAWCGKLRHIKKAHKKKINLTAQNPPGFKQEETKNHKEKYDDEWT
EKTGDRSSGLEDYVTNPNAFVCVPIAEAENISEGFEDEDKLSTFTDTEYSKQLVSVSPSE
GSTVDLTNPEELLRKIREFAEDSKTPEKCFPEGCVRYLCCYMSNARRFGEETWWNLRKTC
YQIVEHSWFESFIIFMILLSSGALAFEDIHLNNNKNIRDMLAFLDKLFTFIFVLEMLLKW
VAYGFKKYFTNAWCWLDFLIVNVSSISLINLLGSSDSPMKSLRTLRALRPLRALSRFEGM
RVVVYALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCVNMTEEDSELSDWINNT
EDCRKYNDTGKIFWVNLKVNFDNVGSGYLALLQVATFKGWMDIMYAAVDSREKHEQPKME
HSLFMYLYFVIFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPLNKYQGFLFDIVTRQAFDVVIMVLICLNMISMMVETHGQSETKTNILN
KINILFVAVFTAECVLKLAALRQYYFSNAWNIFDLVVVIMSLVASLLSGIGKAFEHFLPP
TLFRVIRLARIGRILRLIRAARGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANF
AYVKKEHGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNVNGTIGEC
GKPAIGIIYFVSYIIISFLIVVNMYIAVIMENFNAATEESTEPLGEDDFDLFYEIWEKFD
PEATQFIAFSALSDFADALAEPLRVPKPNKVELIAMDLPIVSGDRIHCLDILFAFTKRVL
GDSAVLDTLKVQMEEKFMAENPSKTSYEPISSTLRHRQEEASATVIQRAYRSHLLLRSIR
NKASNLHHHRTCSGDTLTGVIPEKEELTTSMMGENYSRSPDKSETLSSASFPPSYDSVTR
ASSTNLMVENEEITGNQQSPGIK
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttctcactgcctggtaccaacaacttccgtaaattcacccgcaaatccttg
gctgctattgaaaagagaattgctgccaaaaaagattgtcaaagaaatactacagatcac
agacctgaagagaaaccacgtcctcaacttgatctaaaagctttccagaaactaccagct
ctctatggaaatccacctcctgagctcattggggaaccactggaggatcttgacccatac
tatgatgatcacaaggttttcatagtgctaaacaaacagaaaacaatcttcagatttact
gctacgtctgccttatggatcctcagtcctttccatccaatccgaagagcagcaattaaa
attttagtacatttagcattcactttctttatcatttgcactattataaccaattgtgta
ttcatggctctggccgaatcctataggaattcttcttcatggaataagtatatcgaatat
actttcactggcatttacacttttgaatctttgataaaaatattggcaagaggattctgt
ctaaatgaattcactttccttcgagacccctggaactggctggatttcagtgttattgtt
atggcgtacttgggagctgttagtgatctgggaagcgtgtcagcccttcggacgttcagg
gttctgagagctttaaaaaccatttcagtagtcccaggactcaagatcattgtaggggca
cttatccagtctgtcaagaaactttctgatgtgatgatcctgactgttttctgcctgtgt
gtctttgccctcataggcctccagctttttaagggcaatctaagatataagtgtatcagg
aactctactgagtctcttaatgtatttagaaaccctaacaaaacatgggaatcctatgaa
agttttcaaaactatacagcacactttgctaagaaagggggcacctcagatattttgcta
tgtggtactgctgctgggacctgtccttcagactatgtgtgtaagaaaattgggccaaat
cctgactatggtttcactagttttgatacatttggctgggcttttctctctttattccgc
ctgatgacccaggactactgggagcgtctgtaccagcagaccctcagagcttctgggaag
gtgtatatgctcttcttcatgctggtcatctttctgggctcattttatctagtcaatttg
attctggctgtagtgaccatggcatatgaagaccagaacaaagccaccattgctgaaact
gaggcaaaggaaaggaaatttcgggaagccatggaattaatacagaaggagcaggaggca
ctggctatgaaaggagtggatgtctcatcaatatgctcctttgacaccgtttctctgtct
accaaagaaatcaaagaaagaagcaataggaaaaagagaaataagtccttgggaatagaa
gataatgaagaccaacaattttccaactcacagtccacagacattcaacgaaagttgcca
gctgtaaatgatgagaggagcatgatgcctttgcctcctcgtctatcagtggagtacatt
aatgaggcacttcagagacaaagggcagcaagtgcagtcagcataattaccagtgtcttg
gaggaacttgaagaatctcagcggagatgcccacggttcctgagtgattttgctttcaag
tatctaatttgggactgttgtccactttggttgagaatcaagaaaaaagtgactgctttc
ataaaagatccttttactgatctcaccatcactctttgcattgtgatgaacactttgttc
atggcactggagcacgataatatgtcacctgattttaaaatgatgctcaaagtaggcaac
ttggtttttacaggtatcttcactgcagaaatgatcttaaaaatcattgctctagatccc
tattattattttcagcagccctggaacatttttgacagtgtaattgtcacgttgagttta
attgaactgagtttacccagagacaaaagcaggaagaaaagcaaaaaaggaggaaccctg
tcagttttacgatccttcagactgctgagggtcttcaaattggcaaaatcctggccaacc
ttaaacactctaataaaaatcattggtaactccatgggagcactgagtaacctgaccctt
gtcctggcaatcatcgttttcatctttgctatagtaggggtgcaactttttgggaaaagc
tatggggagaaaagatttaaaatagacaaagaaggccagccacgctggcacatgatggac
tttttccactcattccttgttgtcttccggattctgtgtggagaatggattgagaccatg
tgggactgcatggtggttgctgagccatctctgtgcctgctcgtctttctactggtcatg
gttttaggaaacttagtggttcttaacctcttcattgcactgctgctgaattccttcagt
gctgactctctccagacagcagaggatgacagagagttgaacaaccttcgaatcgccttt
gctcggattcacaagggatttcactttgtgaagagtgttacatgggatgcctggtgtgga
aagctcaggcacatcaagaaagcacacaagaagaaaatcaatttgactgcacagaaccca
cctgggttcaagcaagaggaaacaaaaaatcataaagagaagtacgatgatgaatggact
gagaaaactggggacagatcctcaggtcttgaagattatgttaccaaccccaatgcattt
gtttgtgtccctattgctgaggcagagaacataagtgagggttttgaagatgaagataag
ctgagcacatttacagacacagaatatagcaaacagctggtcagtgtcagcccctctgaa
ggcagcacagtggatctgacaaaccctgaagagcttttgaggaagattcgagagtttgct
gaagactccaagactccagaaaaatgttttccagaaggttgtgtccgatacctctgttgt
tacatgagtaatgccagaaggtttggcgaagaaacatggtggaatctgagaaaaacctgc
taccagattgttgaacactcctggtttgaatcctttattatattcatgatccttctgagc
agtggagccctggcatttgaagacatccatttaaataataataaaaatattagagatatg
ttagcatttcttgacaaactgttcactttcatctttgttctggagatgctcttgaaatgg
gtggcttatggcttcaagaagtactttaccaatgcctggtgctggctggacttcctaatt
gtaaacgtaagttctatctctttaataaacctcttgggcagttcagacagtcccatgaaa
tctcttaggactctgcgagctctgagacccttaagagcattgtcacgatttgaggggatg
agggtggttgtctatgccctcgtgggagccatcccttccatcatgaacgttctgcttgtc
tgcctcatcttctggctcatctttagcatcatgggagtgaacctatttgctgggaagttt
tggagatgtgtcaatatgacagaagaagattcggaattaagtgattggattaataacaca
gaagactgtagaaaatataatgacacaggaaaaatattctgggtcaacttgaaagtcaac
tttgataatgttggctctggctacctggctcttctgcaggtggcaacatttaaaggttgg
atggacatcatgtatgcagcagtagattcacgagagaaacatgagcagccaaaaatggag
catagtctatttatgtatctctactttgtgatcttcataatcttcggatctttctttacc
ctgaatctatttgttggtgttattattgacaacttcaaccaacaaaagaaaaagataagt
ggggaagatatctttatgacagaagaacagaaaaaatactacaatgcaatgaaaaagctg
ggatccaagaaacctcaaaaacctattccaagaccactgaacaaataccaaggattcctt
tttgacattgtaacacgccaagcttttgatgttgtcatcatggttctcatctgccttaac
atgatctccatgatggtggaaacccatgggcaaagcgaaacaaagactaacatccttaac
aaaatcaatatactcttcgttgctgtctttactgcagaatgtgtactgaaattggcagct
ctgaggcagtactatttctcaaatgcctggaatatatttgatttagtcgttgtgatcatg
tcacttgttgcctcactgctttctggcattggtaaagcatttgagcatttcttaccacct
acgctcttcagggttatccgcttggctcggattggccgaatactgagactcatccgggct
gccagagggattcgaactctgctttttgccttaatgatgtccctccctgctctgttcaac
attggcctcttgctttttctggtcatgttcatttatgccatttttggcatggctaacttc
gcctatgttaagaaggagcatgggattgatgacatgttcaacttccaaacctttgctaac
agcatgctctgtctcttccaaatcaccacttcagcgggctgggatggtcttctcagtcct
attttaaacactgggccaccatattgtgatccaaacgtaaatggtactataggtgaatgt
ggtaaacctgccataggcataatttattttgtaagttacatcattatatcatttctcatt
gttgtaaacatgtatatagctgtgattatggagaacttcaatgctgctacagaggaaagt
acagagcctttaggggaagatgactttgacctcttttatgaaatctgggagaagtttgat
cctgaggcaactcagtttatagctttctctgcactttcagactttgcagatgcactggct
gaacctttacgtgtaccaaaaccaaacaaagttgaactcatagcaatggacctgcctatt
gtcagtggagataggattcactgcctggatatcctgtttgcttttaccaaaagagtgtta
ggagattctgctgtgctggatactcttaaagtacaaatggaggagaagttcatggctgaa
aatccatccaaaacatcctatgagccaatctcttctactctcagacacagacaagaggaa
gcttctgccactgtcatccagcgtgcctacaggagtcatctgctcctgcgctccataagg
aataaggcttctaacctgcaccatcacagaacttgcagtggtgacacccttacaggtgtt
attccagaaaaagaagaacttactacatctatgatgggtgaaaattatagcaggagtcct
gacaagtctgaaactttgtcttcagcatcctttcctccatcgtatgacagtgtgacaaga
gccagtagtaccaatctcatggttgagaatgaagaaattacaggtaatcaacaatctcca
ggcattaaatag
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integrated database retrieval system
