Chaetura pelagica (chimney swift): 104396220
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Entry
104396220 CDS
T08631
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03030
DNA replication
cpea03410
Base excision repair
cpea03420
Nucleotide excision repair
cpea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104396220 (RFC2)
03410 Base excision repair
104396220 (RFC2)
03420 Nucleotide excision repair
104396220 (RFC2)
03430 Mismatch repair
104396220 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpea03032
]
104396220 (RFC2)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104396220 (RFC2)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104396220 (RFC2)
DNA replication proteins [BR:
cpea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104396220 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
104396220 (RFC2)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104396220 (RFC2)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104396220 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
104396220 (RFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
AAA_24
Mg_chelatase
AAA_11
AAA_assoc_2
DNAX_ATPase_lid
AAA_19
nSTAND3
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_30
AAA_25
AAA_23
NTPase_1
RuvB_N
MeaB
RNA_helicase
SLFN-g3_helicase
Rad17
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104396220
NCBI-ProteinID:
XP_010004339
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLE
LNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKT
TRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVPYTDDGLEAIIFT
AQGDMRQALNNLQSTYSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNADIDEAYKILAH
LWRLGYSPEDVIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLGRL
CQKTAAPMAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtgtgaaatagttggaaatgaagacactgtgagcaggctggaggtctttgca
aaagaggggaatgtacccaatatcataattgctggtcccccaggcacaggtaaaaccacc
agtatcctctgcttggctcgtgctctgcttggtcctgcattaaaggatgctgttttggag
ctgaatgcctcaaatgacagaggcattgatgtggtgagaaataagatcaagatgtttgcc
cagcagaaggtcacactccccaaaggtcgacataaaatcatcatccttgatgaagcagac
agcatgacagatggagcccagcaagccctgaggagaacaatggagatttattccaagaca
actcgttttgcacttgcctgcaatgcctctgacaagatcatagagcccattcagtcccgc
tgcgcagtgctgcgttacaccaagctgacagatgcacagatccttgccaggctcctgaaa
attgttgagaaagaagatgtgccatacacagatgatgggctagaagccattatcttcaca
gcccaaggagacatgagacaggcactaaacaacttacagtccacatattctggatttggc
tttataaacagtgaaaatgtctttaaggtatgtgatgagcctcatcctctgttggtgaaa
gaaatgatacaacactgtgtaaatgcagatattgatgaagcttacaagatccttgcccac
ctgtggagacttggatactctccagaagatgtgattggcaacatcttccgtgtgtgtaag
acctttcaaatgccagaatatctgaaactggaatttatcaaggaaattgggtacactcac
atgaaggttgcagaaggtgtgaactcactgctgcagatggctgggctgctgggcaggttg
tgccagaagacagcagcacccatggccagttag
DBGET
integrated database retrieval system