Chaetura pelagica (chimney swift): 104396412
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Entry
104396412 CDS
T08631
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104396412 (PKD1L2)
Ion channels [BR:
cpea04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104396412 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
Lectin_C
REJ
Gal_Lectin
Ion_trans
GPS
AGA2
Abhydrolase_9_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
104396412
NCBI-ProteinID:
XP_010004552
LinkDB
All DBs
Position
Unknown
AA seq
2485 aa
AA seq
DB search
MTGVTSQAFEEGSKKSGAVISKTRTTQSTALTMWLGIAVLISLAVRWALEEATTEEGIPC
SKYQLAFNSSCYEFVRLQRTFTGAQSWCERGGGHLVFIENEETQEFLQKHIAEDQEWWIG
LISNSLLNETTDGAMIWLDTSNISYSNWYKDQPSPYSSSCGYILKNAKYQWGVTENCSQE
FYFICEFESGQSVACDHYNATVQCGSGEVIQIGESFYGRKTPHYCVLETPLQHDTDGDCS
WISVKDEVAGQCHGLQACQVAADGTFFGDPCPASGSYLSIQYHCKEGLQLVVTDASFVFE
DITVSLNWLLSPYSGNLSCVISTGDGHTIDPYYPLTLVSNITYRYLTPGEFTVFVECTTS
EWHVTAQKRVTVQDKMDQLSITGCYSQYESGNHSHCQTLYRELLWIQVELDGGNGVTYII
RVGNMTLTESSAKKGIVPHNLTLDSASQELLGPGIHQLEIRASSNTTTSEISESIDVHLV
EPVSGLQAALASHTLQLGENLEINVSVSHGTPDKLEFEVTGSNETHSHKEEGPAGEPRTY
TIPMHSAGTFLVKVVAMNAFSNMSLDLGFITVLANSSHKEDSSKEGDSSQTNIQKTNDHK
RKHKINIKPSRHVDPFTTVLLGWPDNNNNSSFLWSCGACWPEWNECVQQQIILTNQTEVQ
IPPSCLPPPKSAVTVRVTVRNDVSEERQDEQCLYVTAKQELQLEIRCESNCKPVNTSDEV
VLSVSGQKDYQDIYYNWYLDNTFQTKSTTLPLACGLTGFWQNSLNLLQSNTSLLKMNSSF
LQTQGEAFQIKVTAMTPRGYGEETYLVSSLPPPDVPSCAVSPRQGSVLTTFTVSCSTPCL
VDSCQPSRNRQLTYCFYLKSNSLLHCGPDPELFPVYLPLGEEENNFILNLTITVSNKYGD
TAQTYASVKVGHADMTNGNVTLRAIVSEKANTILNNGNSSMSLFQLYKSVTSVLNQETQE
ENFNISLQTDMRKELRGLMLATLSAVNVTSVHTALKMSEVLEEITYRSEELSVSAQVEAS
NTLKDVSASLLTVNTEDSRDDQKLKDAARYLFNAVSNVLKASAGIRATNTSVPEAEQSSV
SHLLLNTVENLQSALLFGKQPDDEPTVLTTPTATMYLHRLQTENMDGTSINICNSSSASF
TLPPASSLSVSGVHDETVDIRMVSFAVNPFFSSDTSFDIKGTVGGLSLTGLDGLIIPVSD
LKENIEIMLPRLPASQEVKTLLNLGNFSIFQVNVTSENASIVIHLESERDIPLILYLGFG
YHPNETNYDMKNHLLPLYVXGETNAWVLSPEELIFGEGTYYFMVLQDIGMDSTVYDGLTI
AVTCFASRCVFWDEHQGKWNNHGCHVGPKTNPGSTQCFCNHLTFFGSSFFVIPNAIDVSK
TAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPFAQYRYL
VTVFTGHRRGAATTSQVTLTLYGVEGESEPHHLIDPDTPVFERGGVDVFLLCTFFPLGEL
QSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAVDIGECVLDKVFPVATEQD
MKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGV
PKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNIRPRPAKQGREKKPGK
NGRVSPSLLSTPQVTQAVSLTPEAVTKDIRRVASSLFKALKTPSLISVSDLGKSTNINTL
LSLVEDIICQQNRAGQELYDESKKKDDPIIVTLGAMDIQEKTRSPVPDKVMCERLKCSDY
NRCLYMQLQHIEEELELLGPLKFQMPQSYTQAIQQVQHMKNLLENQTCSSAPSFSGDGKK
SSSYKGLPWWFVFIAWFLVAATSAVSGFFTMLYGLHYGKENSIKWLISMAISFLESLFIT
QPLKVLGFAAFFALVLKKVEHEDEENTAIDGPLCAPGDTNPFFGARRDSRSNIYQPPPAA
DVEKMKISCMKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIESSFTDGFH
DIYSYQDFFTWANTTLVKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCPISXRTPAS
SDYGEHWNTSVFDNSSDLSSAWQYQSQFKLRGQPSWGKLAIYRGGGYVIHLGTDPKNASR
ILQYLFNNVWLDTFTRAVFVEFTVYNANVNLFCIISLMFETNALGAFFTSAELQSVRLYP
YTNSLHIFVVAAEIIYFLFIVYYMIVQGKLMKTLRWRYFHSKWNLLEIAIILISWSALSV
FVKRTILGTRDISYYQEHKEDCVSFNETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKL
NMITSTLRRAWGDISGFITVITIMFLAYSIATNLIFGWKLYSYKTLFDSAETMVSLQLGI
FNYEEVIDYNPILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHHQASEEEEIVDLM
LMKLFSFFGIKCKKEEKPAATDQLE
NT seq
7458 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggtgacatctcaagcttttgaagaaggcagcaaaaagagtggtgctgtgata
agcaagaccagaaccacccagagcactgcgctgacaatgtggcttgggattgcagttctc
atctctcttgctgtacgctgggctctggaggaggcaaccactgaagaaggaatcccttgc
tcaaagtaccagctggctttcaacagttcatgctatgagtttgttagactccagcgtacc
ttcacaggtgcccagagctggtgtgagagaggaggggggcacctggtctttattgaaaat
gaggaaactcaagagttcttgcaaaaacatattgcggaggatcaggaatggtggataggg
ctgatctcaaactccttgctgaatgaaactactgatggggcaatgatttggctggacact
tcaaatataagctacagtaactggtacaaggatcagccatctccctactcatcctcatgt
gggtatatcctgaagaatgccaagtatcagtggggtgtgactgaaaattgcagccaggaa
ttttacttcatctgcgagtttgaatctggccagagcgttgcttgtgatcattacaatgcc
actgtacagtgtggatcaggagaagttattcaaattggagagagcttctatggacggaag
acccctcactactgtgtactggagactcctctccaacatgatacagacggagactgtagc
tggatcagtgtcaaagatgaagtagcaggccagtgtcatggtcttcaggcctgccaggtg
gcagcagatggcactttctttggagatccttgtccagcttcaggaagttatttgtctatt
cagtaccactgcaaagaaggtctgcagctggttgtaacagatgcatcctttgtctttgaa
gatatcacagtgagtttgaactggctgctctctccatactctggcaacctttcctgtgtc
attagcactggagatggccacactattgatccttactaccctctaacactggtcagcaac
atcacatatagatacttaactcctggagagttcacagtttttgtggagtgcaccaccagc
gagtggcacgtgacagctcagaagcgggtgactgttcaagataagatggatcagctgagc
attactgggtgctacagccagtatgagtctggaaaccactctcactgccaaacgctgtac
cgggagttgttgtggattcaagttgaactcgatggaggcaatggagtgacctacattata
agagtgggtaacatgacactcactgaatccagtgcaaagaaaggaattgtccctcacaat
ctgacacttgacagtgcctctcaagagctgctgggcccagggatacatcaactggaaatc
cgagcatctagcaacacaaccacatcggagatctctgagagcattgatgtccacttagtt
gagccagtgtctggtcttcaggccgcattagcttctcacactctgcagctgggggagaat
ctggagataaatgtctctgtgtctcacggcaccccagataagctggagtttgaggtgact
ggatctaatgaaactcactctcacaaagaagagggccctgctggggaacctcggacgtac
accatccccatgcactctgcaggtactttcctagtgaaagtggtggccatgaatgccttc
tcaaacatgagtctggaccttgggttcatcactgtgttggcaaacagttctcataaagaa
gattcttctaaggaaggagacagctcccaaacaaatatccaaaagacaaatgatcacaaa
agaaaacacaaaataaatattaaaccgagtcgtcatgtggatcccttcacaactgtactt
cttggctggccagacaacaacaataattccagttttctctggtcctgtggagcttgctgg
cctgagtggaatgaatgtgtacagcaacagataatcctaaccaaccaaactgaggtgcaa
atcccaccttcctgccttcctcctccaaagtctgcagtgacagtcagggttacagtccga
aacgatgtcagtgaagaaaggcaggatgaacaatgtctctatgtgactgcaaaacaagaa
ctgcaactggaaatcagatgtgagtcaaactgcaagccagtgaacactagtgatgaagtt
gttctgagtgtctctggacagaaggactaccaggacatatattataactggtatttagat
aatacattccaaaccaagtctacaaccctccctctagcctgtggcttgactggtttctgg
cagaactctttgaatctgcttcaaagcaacacatccctattgaaaatgaacagctccttc
ttgcagacacagggagaagcttttcagattaaagtaacagcaatgactccacgtggctat
ggggaggaaacgtaccttgtgagctccctgcctccgcccgatgtccccagctgtgccgtg
tctcccaggcagggatcagtgctcaccactttcacagtctcctgcagcactccctgcttg
gtggattcatgccaacccagtcgtaacaggcagctcacatactgcttctatctgaaatca
aattctctcctgcactgtggcccggatcctgaactcttcccagtttatcttccacttgga
gaagaggaaaataatttcattttaaatctgacaattactgttagcaacaaatatggtgat
acagctcaaacttatgcttcagtaaaggttggacatgcagatatgaccaatgggaacgtg
accctgcgggctattgtatctgagaaggcaaacaccatcctcaacaacgggaacagcagc
atgagtcttttccagttgtataagtcagtgacatcagtccttaatcaggagacccaagag
gaaaactttaacatttctttacagacagacatgcgaaaagagcttcgagggctgatgctg
gcaactctctctgctgttaatgtaacatctgtgcatactgctcttaagatgtcagaagta
ttggaagaaatcacttacaggagtgaagagctgtctgtttcagcacaggtggaagctagc
aacactctaaaagatgtcagtgcttccttgctcactgtaaacacagaggacagcagagat
gatcagaagctaaaagatgcagctagatatctatttaatgcagtcagcaatgtccttaaa
gcttctgcaggaatcagagctacaaacacttcagtaccagaggctgaacagagttcagtg
tcacacctgctcctgaatacagttgaaaatctacagagtgcccttctgtttgggaaacaa
ccagatgatgaaccaacagtcctcacaactcctactgccacaatgtatctacacagatta
caaacagaaaacatggatgggacatccattaatatctgcaattccagctctgccagcttt
accctcccacctgcttcctctctcagtgtttcaggagttcatgatgaaacagtggatata
aggatggtgagctttgctgtgaatcccttcttctccagtgacaccagttttgacatcaag
ggaacagtgggaggtctaagtcttactggtctggatggcttaatcataccagtcagcgat
ctcaaagaaaacattgagataatgttaccaaggcttccagcatctcaggaagttaagact
ctgttgaatcttggcaattttagcattttccaagtcaatgtcacctcagaaaatgcatct
atagtgatccacctggaatcagaacgtgacattccactaatactgtatctagggtttggt
tatcatccaaatgaaactaactatgatatgaaaaatcatctgttacctctttatgtttaa
ggtgagacaaacgcctgggttcttagcccagaagaactcatttttggagagggaacctac
tatttcatggttttacaagatataggaatggattccacggtctatgatgggctaaccata
gctgtcacttgctttgcatctcgctgtgtgttttgggatgagcaccaggggaagtggaac
aaccatggatgccatgtaggaccaaaaacaaatcctggaagcacccagtgcttctgcaac
catctgaccttttttgggagctccttctttgtcatacccaatgccatagatgttagcaaa
actgcacagctattcggaacatttgtggacaaccctgtggtggtgacaactgtaggatgt
atctttctgatatatgtgcttgtagtaatatgggctcgaaggaaagacatccaggatgat
gctaaagtgaaaatcaccgtgctggaagacaatgacccctttgctcagtatcgttatctt
gtgacagttttcacaggccaccgccgcggggcagccacaacatcccaggtgactctcaca
ctctatggggtggaaggagagagtgagccacaccatctaattgatcctgatacaccagtc
ttcgaacgtggaggagtggatgttttcctcctctgcaccttcttccctcttggagaactg
cagagtattagattgtggcatgacaactcgggggacagcccatcctggtacgtgaatcga
gtattggtccatgatctggcttgggatcagaaatggtacttcctctgtaactcttggcta
gctgttgatattggagaatgtgtcctagataaagtgtttccagtagctacagaacaggac
atgaagcagttcagcaatctgtttttcatgaagacctccaagggtttccaggatgggcac
atctggtactcagttttcagccgctctccacgaagctccttcacacgagcccagcgtgtg
tcatgttgcttctcactgcttctctgcaccatgctgaccagcatcatgttctggggagtg
ccaaaggatccagccgagcagaaaatggatttgggtaagattgagttcacgtggcaggaa
gtgatgattggctttgagagctctctcctcatgttccccatcaacctgctcattgtgcag
atcttcaggaacatacgaccccgcccagccaagcagggaagagagaagaagccgggaaag
aacggtcgagtgtccccgagcctcctttccaccccacaggtcacccaggctgtctcacta
actccagaggctgtgacaaaggacatcagaagagttgccagctcactctttaaggccctg
aagactccatctctcatttcagtatcagatctcggaaaatcaactaacatcaacacactt
ttgtcattggtcgaggacatcatctgccagcagaacagagctggccaagagctttatgat
gagagcaagaagaaggatgatcctataattgtcacattaggtgctatggacatacaagaa
aaaacaagaagcccagttccagataaggtaatgtgtgagcgactgaagtgcagtgattac
aaccgctgcctgtacatgcaactccagcacattgaggaggagctggaattactggggccc
cttaaatttcagatgcctcagagttacacacaagccattcagcaggttcagcacatgaag
aacctcctggagaaccagacctgctcatcagccccgagcttctctggtgatggcaagaaa
agttcttcttacaaagggctgccctggtggtttgtgttcattgcttggttccttgttgca
gccaccagtgctgtatctgggttctttaccatgctctatgggctgcattatggcaaagag
aactccatcaagtggttgatctccatggccatctccttcttggaaagtcttttcatcaca
cagcccttaaaggtgctgggatttgctgctttttttgctctggttctgaagaaggtggaa
catgaggatgaagaaaacacagctattgatgggcctttatgtgcaccaggtgatacaaat
cctttctttggagcccgaagggacagtagaagcaatatttaccagccacctcctgcagct
gatgtggagaaaatgaaaatcagctgcatgaaggagcagaaagcatttgccctcatcaga
gaaatcctggcttatctggggtttttatggatgctgttgctggttgcctatgggcagaga
gaccccaactcctactacttaaataaacacattgagagcagctttacagatggattccac
gatatctacagttaccaggattttttcacatgggcaaacaccacattagtaaaaaatctt
tatggatcatataaaggattcattacagatggcaactccaagctggtgggtagtgctcga
attcgccaggtaagagtgaaaggagacacctgccctatttctncccgaactccagcatca
tcagattatggggaacactggaatacttcagtctttgataactcctctgacctgagctca
gcatggcagtatcagagtcagttcaaactgagaggacagcccagctggggcaaacttgcc
atctacaggggagggggatacgtgattcacctggggactgatcctaagaatgcctccaga
attctccagtaccttttcaacaatgtctggctagacaccttcacaagagcagtgtttgtt
gaatttacagtctacaatgccaatgtgaacctgttttgcatcataagcctgatgtttgaa
accaatgctttaggggccttcttcacaagtgcagagctgcaaagtgtccggctttaccca
tacaccaacagtctccacatctttgtggttgcagcagaaataatttacttcctctttatt
gtgtactacatgatagtacagggaaaactgatgaagactctgagatggagatacttccac
agcaagtggaatctcctggagatagccattatattgatcagctggagtgccctctcagtg
tttgtgaagcggacaatccttgggacacgagacatcagctactaccaggaacacaaagag
gactgtgtaagctttaatgaaacagcaagagctgatgcagttcttggctacctgattgca
ttcctagtgctcctctccacagtgaaattgtggcacctcctgaggctcaaccctaaacta
aacatgatcacttcaactctaaggagggcgtggggggatatctctggattcatcactgtt
attacaatcatgttcctggcctattctattgctacaaacctaatctttggctggaagctc
tactcttacaaaactctctttgattcagcagagaccatggttagccttcagctgggaatc
ttcaactatgaggaggtcatagactacaatccaattttaggctccttcttaattggatcc
tgcataattttcatgacatttgtggtactgaatctcttcatttcggtgattctggttgct
tttagtgaggagcagaagcaccaccaggcttctgaagaagaagagattgttgacctaatg
ctcatgaaactgttcagtttctttgggattaaatgcaagaaggaggagaagccagccgct
actgatcagctggaataa
DBGET
integrated database retrieval system
