Chaetura pelagica (chimney swift): 104396453 Help Entry 104396453         CDS       T08631                                  Symbol CNTN1 Name (RefSeq) LOW QUALITY PROTEIN: contactin-1   KO K06759   contactin 1 Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04514   Cell adhesion molecules Brite KEGG Orthology (KO) [BR:cpea00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     104396453 (CNTN1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:cpea04515]     104396453 (CNTN1)    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpea00537]     104396453 (CNTN1) Cell adhesion molecules [BR:cpea04515]  Immunoglobulin superfamily   Contactins    104396453 (CNTN1) Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cpea00537]  Others   104396453 (CNTN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ig_3 I-set ig fn3 Ig_2 V-set Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Interfer-bind Tissue_fac DUF4998 Fn3-I_PB4 Big_3_4 NDNF Motif Other DBs NCBI-GeneID:  104396453 NCBI-ProteinID:  XP_010004598 LinkDB All DBs Position Unknown AA seq 1013 aa AA seqDB search SEEGNKGYGPVFEEQPIDTIYPEESSDGQVSMNCRARAVPFPTYRWKLNNWDIDLTKDRY SMVGGRLVINNPEKSRDAGKYVCVVSNIFGTVRSSEATLSFGYLDPFPPEERYEVKVREG VGAVLLCEPPYHYPDDLSYRWLLNEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSC FVSSPSITKSVFSKFIPLIPQSDRAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPE LRWSKYLEPMPATAEISMSGAVLKIFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPE WVEHINDTEKDIGSDLYWPCVAAGKPIPTIRWLKNGVSFRKGELRMQSLTFDDAGMYQCI AENMHGIIYANAELKIVASPPTFELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGT ELLVNGSRIRIWDDGSLEIINVTKLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPL NVDVTVGENATMQCIASHDPTLDLTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKN VQLRHAGRYMCTAQTIVDNSSASADLVVRGPPGPPGGIRVEDVRDTAVALTWSRGTDNHS PISKYTIQSKTFLSEEWKDAKTEPSDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEP SMPSQRIRTEGAPPNVAPSDVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEK EWRRVTVTNPEIGRYVHKDESMPPSTQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIP TDVSVKVLSSSEMSVSWHHVSDKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLK PNTRYHVDVSAFNSAGYGPPSRTIDIVTRKAPPSQRPRIISSVRSGSRYIITWDHVTAKS NESAVEGYKVLYRPDGQHEGKLFSTGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKI SGAAAGVPTLLLVLVVPXPWVSLPARDSECSWIYLVLCLKERTPFEDEDHDSF NT seq 3042 nt NT seq  +upstreamnt  +downstreamnt tcagaggaaggaaacaaaggctatggacctgtttttgaggagcagcccattgataccatc tacccagaagaatcttcggatggacaagtttcaatgaactgcagggctcgagcagttcct tttcctacttacaggtggaaactcaacaactgggatattgatttaacaaaggatcgctac agtatggtgggaggcagacttgttatcaataatccagagaagtcaagggatgctggaaaa tatgtctgtgtagtatcgaatattttcggaactgtcagaagcagtgaagccactctgagt tttggatatctggatccctttccacctgaggaacgctatgaggtgaaggtacgagaaggt gttggagcagtgcttctttgtgagcccccttaccattacccagatgatctcagttatcgc tggcttctaaatgagttcccagtattcattgctttggacaagcgacgatttgtgtcacag acaaatggaaacctctacattgcaaatgtagaagcatcagataagggcaattattcatgt tttgtgtccagcccgtcaataacaaagagtgtattcagtaaatttataccacttatccca cagtcagatcgtgcaaaagtatatcctgctgatatcaaggtaaagttcaaggacacttat gctctcctggggcaaaacgtgacgctggagtgttttgctcttgggaatccggttcctgaa ctgagatggagcaaataccttgaacccatgccagccacggctgagataagcatgtctggt gcagttcttaagatcttcaatattcagtatgaagatgaaggactttatgagtgtgaagct gaaaactataaaggaaaagataaacatcaagcaagagtttatgtacaagctgctcctgag tgggtggaacatatcaatgacacagagaaggatataggcagtgacctctactggccttgt gtagctgcaggcaagcctattccaacaattagatggttgaagaacggtgtctcgttccgg aaaggtgaactaagaatgcaaagtctgacctttgacgatgccggcatgtaccaatgtata gctgaaaatatgcatggaatcatttatgcaaatgctgaactgaagattgtggcttcaccc cctacgtttgaactgaatcctatgaagaagaaaatcctagctgctaaagggggccgtgtg atcattgaatgcaagcctaaagctgctcctaagccaaaattctcatggagcaaaggaaca gaattgcttgtaaatgggagccgcatacgtatctgggatgatgggagcctggaaattatc aatgtcacaaagctggatgaaggtcgctacacctgttttgcagaaaataaccgaggaaaa gctaatagcaccggtgtcctagaaatgacagaagctacaaggattactttagctccattg aatgttgatgtcactgttggagagaacgctaccatgcaatgcattgcatcccacgatcct acattagacctgacatttatttggtctctaaatggatttgtaatagattttgagaaagag cacgaacattatgaaaggaatgttatgattaaatccaacggggagctgctgattaaaaac gtccagctgcggcatgcggggaggtacatgtgcaccgctcagaccatcgttgacaactcc tcagcttcggctgacctggtggtaagaggtcctccaggccctcctggaggtataagagta gaagatgttagagacactgctgtagcacttacctggagtcgtggaacagacaatcacagc cccatttctaaatacactatccagtcaaaaacctttctatctgaagagtggaaagatgcc aaaacggaaccatcagatattgaaggaaatatggaatctgctacagtgattgatttaatt ccatggatggaatatgaattccggataatagcaacaaacaccttggggacaggagaacct agtatgccatcacagagaataagaactgaaggcgctcctccgaatgtagctccttctgat gttggaggggggggtggaagcaatcgagagctgacaataacatggatgcctttgtcaaga gaataccactatggcaataactttggttatatagtggctttcaaaccatttggtgagaaa gaatggagaagagttacagttactaatcctgaaattggccggtatgtccacaaggatgaa tcaatgccgccttcaacccagtaccaagtaaaagtgaaagcttttaacaacaaaggggat ggaccattcagtctcactgctgtcatttattcagcacaagatgctccgactgaaatacct acggatgtgagcgtaaaagttttgtcatcttctgaaatgtctgtttcttggcaccatgtt tctgataaatcagtggaaggatatcagattcgttactgggctgctcatgataaagaagca gctgcacagcgggtacaagtgagcaatcaagaatattcaaccaaactggaaaacctgaag cctaatactcgctatcatgtagatgtttctgccttcaatagtgcaggatatggacctccc agtagaaccatcgatattgttaccaggaaagcacctccaagccaacgtccaagaattatc agttcagtcagatctggttcaaggtacatcatcacctgggatcacgtgacagccaagtca aatgagtctgcagttgaaggatacaaagtactttatagaccagatggacaacatgaaggc aagttgttttcaactggaaagcacacaatagaggtcccagtccccagtgatggtgaatat gttgttgaggtccgagcacacagtgaaggaggagatggagaagtagctcaaataaaaatt tcaggtgccgctgccggagtaccgaccctgctcctggtcctggtggttcctnnaccctgg gtgtccttgcctgctcgggattctgaatgtagctggatttaccttgtcctctgcctaaaa gaaaggactccctttgaagatgaggaccacgattctttttga

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