Chaetura pelagica (chimney swift): 104396454
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Entry
104396454 CDS
T08631
Symbol
ADAMTS20
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 20
KO
K09609
a disintegrin and metalloproteinase with thrombospondin motifs 20 [EC:3.4.24.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104396454 (ADAMTS20)
Peptidases and inhibitors [BR:
cpea01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
104396454 (ADAMTS20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
GON
TSP_1
ADAMTS_spacer1
Reprolysin
TSP1_spondin
ADAMTS_CR_2
TSP1_CCN
Pep_M12B_propep
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
Reprolysin_2
Reprolysin_4
DUF3285
Motif
Other DBs
NCBI-GeneID:
104396454
NCBI-ProteinID:
XP_010004599
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MLSEFSDVFLHNRNXSRRKRSLEAPLEPAAFRTHYQLRAYGQVFQLNLSADAGFVAARYR
VVHVGAPQEPPSPDLRHCFYRGHVNARETHVAVFSVCGGLMGTFKAHDGEYFLEPLMKAD
GGEHEDEHNKPHLIYRNEELKKKYKKSHKPCEVSEKELKKSTSLPTFHSLNEGSDVLQKS
LSLKYALNNLSVEDGGNPHSRKKRFLSYPRYVEVMVTADTKMVRHHGQNLQHYVLTLMSI
VAAIYKDSSIGNLINIVIVKLIVIHSEQEGPAITFNAATTLRNFCLWQQAQNTLDDAHPS
HHDTAVLITREDICRAREKCDTLGLAELGTMCDPLRSCSISEENGLSAAFTIAHELGHVF
NVPHDDSFKCKEAGIKHQYHVMAPTLNYHTSPWTWSKCSQKYITEFLDTGYGECLLDKPS
GRIYDLSSQLPGSMYDVDKQCELMFGLGSQVCPYLKQCKRLWCTSTEGIHKGCRTQHMPL
ADGTACGVGMHCRHGICVSREMETRPVDGEWGAWRPYSSCSRTCGGGIKSTTRLCNRPEP
RNGGKYCVGRRMKFRSCNTDSCPKGRKDFREQQCSEFDGRHFNINGLTSAVRWLPKYSGI
SMKDRCKLFCRVSGTTSYYQLKDRVADGTPCGAETNDLCVQGLCRQAGCDHVLNSKARRD
KCGICGGDNSSCRTLAGTFNSARYGYNVVVSIPKGATNIDIRQHSYSGKPEDDNYLALSD
IHGNFILNGNFVVSMSKRELNIQGAIFEYSGSNSTIERINSTDRIEEELTLQVHVYXPDV
RYSFNVPIEDGSDLFTWDPYGPWQDCSRMCQGIRRRRMTCIRKSDHMVVSDQRCELTPTV
PEVSEACNTDCELRWHNVGKSDCTSKCGPGYRSIEIRCMKYSVSKGLSAPVDDQYCVDQQ
KPPTREPCHGDCMLTSWHYTEWSECSRSCERGVRTREAFCMNNLGRHLPDRECQELPRVV
TQSCNEFLCPSWSVSEWSECPVTCGKGMKHRQVWCQLNDEQLRDDFCNPSGRPEAITTCE
LHECASWQVGPWGSCSVTCGRGYQMRAVKCVTGTYRVILDDDRECNAATRPRDNQECDLP
SCPENKKLWTTLLPLVHVAKMTQWRYGSWTPCSASCGKGDRARYVSCRDDHGGVADESFC
AHLPRPAEISSCFSPCGEWQAGNWSPCTVTCDSGIVTRQVICANNHQQINENYCDPEGQP
SKEQECNMPPCPPVYHHIPKMHEHPSHFPEIGYLPIHRPQDNINQRNQPSVGGYQWRTGP
WGACSSTCAGGFHRRVVVCQDEEGRSASYCDKATKPPESRHCDSGPCPRWNYGNWGECTQ
TCGDGIKTRLVICQLPTGQMLGDQNCDILDKPPNMAQCNVHSCPGDVSWHRGPWKSCSVT
CGKGLKFRDVHCFNSFQGKTEEENCRHLKKPRTYKICRAGRCPAWKASSWKECSVSCGVG
IQQRDVYCQLKGLGQVTEAMCSRDPRPTGQRHCWLPACPQHRWVAGGWQDCSASYRRKEI
HRNVKCVDEKQLQVDERFCDAATKPPSTKNCRIAPSKYVVLTGELSQCSASCGFGYQQRI
TYCVGIHSVPNLHARGLRAVVYPECPVEPSPYIYRCNIKGCSQAATWRVGKWTKCSVSCG
VGIQERTVECTTENGLSSDLCQPRLKPDARKICHGEECEIFTTCKDIQIKKGIRKDGEYL
LNIKGRMIKIYCSGMHLENPKEYLTLVKGEADNFSEVYGYRLQNPYECPFNGSRRQDCAC
RNDYLAAGFTVFSKIRFDVASMQIKTTDFLFAQTILGRAVPFATAGDCYSAARCPQGQFS
INLAGTGLRLSSTVRWIAQGNYATSDIHKSHDGTKIYGRCGGFCGKCVPNSIIGLQLQTQ
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgaattttctgatgtattccttcataatagaaatnnnagcaggaggaaaagg
agcctggaggcaccgctggagcccgcagctttccgaacgcattatcagctccgtgcgtac
gggcaggtcttccagctcaacctgagcgctgacgcgggcttcgtggccgctcggtaccgc
gtggtgcacgtcggggccccgcaggagccgccgtccccggatctccgccactgcttctac
cgagggcacgtcaacgcccgggagacgcacgtggcggtcttcagcgtctgcggtggcttg
atgggtacctttaaggcacatgatggtgaatattttttagaacctctgatgaaagcggat
ggaggtgaacatgaagatgaacataacaaaccacatcttatatacaggaatgaagaactt
aaaaagaagtataagaaatcccataaaccttgtgaagtttcagaaaaagagttgaagaag
agcacttcactaccaacctttcacagtttaaatgaaggaagcgatgttttacagaagtct
ctcagtttaaagtatgctttgaataacctatctgtagaggatggtggcaatccacattcc
aggaaaaaacgttttctttcatatccaagatacgtagaagtgatggttacagctgacacc
aaaatggttcgtcaccatgggcagaatttacaacactatgtactaacactgatgtcaata
gttgcagcaatttataaagattcaagtatcggaaatcttataaatatagttattgtaaaa
ttaattgtaattcacagtgaacaggaaggaccagctatcacttttaatgcagctaccacg
cttcgtaatttctgcttatggcagcaagcacaaaacactttggatgatgctcatccttct
catcacgatactgctgttcttatcactagggaagatatctgcagagctagagagaagtgt
gatactcttggtttggcagagctgggtacaatgtgtgaccctctacgcagctgttctata
agtgaagaaaatgggttgagtgctgcttttactatagcacatgaacttggacatgtattt
aatgtgcctcatgatgacagttttaaatgtaaagaagctggaattaaacatcaataccat
gtgatggctccaactttaaattaccatacaagtccatggacctggtcaaaatgcagtcaa
aaatatatcactgaatttcttgatactggttatggtgaatgtctcctagacaaacctagt
ggaagaatatatgatctttcctctcagctgcctgggtcaatgtatgatgtcgacaagcag
tgtgaacttatgtttggtcttgggtcacaagtgtgcccatatctgaaacagtgcaaacgc
ttatggtgcacaagcacagaaggaattcacaagggttgccgcactcagcacatgcctttg
gctgatggaacagcttgtggtgtgggaatgcactgccgccatggaatttgtgtgagcaga
gaaatggagacacgtcctgtagatggagaatggggagcatggagaccttatagctcatgt
tcaagaacttgtggaggtggaatcaagagcaccaccaggctgtgtaatagaccagaacca
agaaatggaggaaagtactgtgttggccgcaggatgaaatttcggtcgtgtaacactgat
tcgtgtccaaaaggcagaaaagatttccgggagcagcagtgctctgaattcgatggcaga
cacttcaatatcaacggtcttacgtctgctgttcgctggctcccaaaatacagtggtatt
tctatgaaagatcgctgtaaacttttttgccgagtttctggaacaacttcctactatcag
ctgaaggacagagttgctgatggtactccctgtggagcagaaaccaatgacctttgtgtt
caaggcttatgcaggcaagcaggctgtgatcacgttttgaattccaaggcaaggagagac
aaatgtggaatctgtggtggtgataattcttcatgtaggactcttgcaggtactttcaac
agtgctcgttatggttataatgttgtagtaagtattcccaaaggagcaaccaacattgat
attcggcagcacagctactcagggaaaccagaagatgacaactaccttgctttatctgat
attcatggaaattttatcttgaatggaaattttgttgtaagcatgtcaaaaagagaactc
aacattcaaggagccatttttgaatacagtggttcaaacagtacaatagaacgaattaac
agcactgacagaattgaagaagagctaaccttacaggtgcatgtttacnaccctgatgta
cgttattcattcaatgtcccaatagaagatggaagtgatctgtttacgtgggatccttat
ggaccctggcaagactgcagcaggatgtgccaaggtattcgaagaagaagaatgacatgc
atacgtaaaagtgatcacatggtagtgtctgatcaaagatgtgaacttacacccactgta
ccggaagtctctgaggcatgtaacacagactgtgaattaaggtggcacaatgttggaaaa
agtgactgcacatccaagtgtggcccagggtatcggtccatagagatccgctgcatgaag
tactcggtttcaaaaggactcagtgctccagtggatgatcagtactgtgttgatcagcag
aaaccaccaaccagagagccctgccatggtgactgtatgttaacaagttggcactacaca
gaatggtcagagtgttccaggagctgtgaaagaggtgtcagaaccagagaagctttttgt
atgaataatttgggtcgtcatcttcctgacagagaatgccaggagcttccaagagtggta
acacagagttgcaatgaattcttatgtccaagctggtctgttagtgagtggagcgagtgt
cctgtgacatgtggcaaaggaatgaagcatcgtcaagtatggtgccaacttaatgatgaa
caactgcgagacgatttctgtaatccaagtggtagaccagaagcaataacaacatgtgaa
cttcatgaatgtgcatcttggcaagtagggccttggggatcatgttctgtaacgtgtgga
cgtggataccagatgcgtgcagtcaaatgtgttactggcacttacagagttattttggat
gatgacagggaatgtaatgctgctactcgtcctagagataaccaagaatgtgacttaccc
tcctgtccagaaaataaaaaattatggactacattgcttcctctagttcatgtggcaaaa
atgactcaatggagatacggatcatggaccccatgctctgcatcctgtgggaagggtgat
cgtgctcgctatgtgagttgtagagatgatcatggaggagtagcagatgaatctttctgt
gcccatttaccacgaccagctgaaatttcaagctgttttagcccatgtggagagtggcaa
gctggaaattggtccccgtgcacagttacgtgtgatagtggaatagtaacaagacaagtt
atctgtgccaacaatcatcaacaaatcaacgagaattactgtgatcctgaaggccaacct
tccaaagaacaagaatgtaacatgccaccatgtccaccagtttatcatcatattccaaaa
atgcatgagcatccaagccattttccagaaataggttaccttccaatacaccgtccacaa
gacaatataaaccagcggaaccagccctctgtgggaggatatcagtggagaactggaccc
tggggagcatgctctagtacttgtgcaggtggatttcaccgtcgagttgtagtttgtcaa
gatgaggaaggaagaagtgctagctattgtgataaggcaacaaaacctccagagtcaaga
cactgtgattctggaccctgcccacgatggaactatgggaactggggagaatgtactcag
acttgtggagatggaataaagacaagactggtgatttgtcagcttcctactggccaaatg
ttgggtgatcaaaattgtgacattctagacaagccacctaatatggcacaatgtaatgtg
cattcttgccctggtgatgtttcatggcatcggggaccttggaaatcgtgttctgttacc
tgtggaaaaggcttgaagtttcgtgatgtgcattgttttaatagcttccaaggtaaaaca
gaggaagaaaactgcagacatttgaaaaaaccacggacatacaaaatatgtagagctgga
agatgtcctgcttggaaggccagcagttggaaagagtgctctgtgtcctgtggagtggga
attcagcaaagggatgtctactgtcagctgaagggcctgggtcaagtgactgaagccatg
tgcagtcgtgatccccggcccactggccagaggcactgctggctgcctgcctgcccgcag
caccgctgggtggcagggggatggcaggattgctcagcatcatatagaaggaaggaaata
caccgaaatgttaagtgtgtggatgaaaagcagctccaagtggatgaaaggttctgtgat
gctgccactaagcccccatcaaccaaaaactgcagaatagctccctctaagtatgttgtg
cttacaggagaactgtcccagtgctcagccagctgtgggtttggttaccagcaaaggatc
acatactgtgttggaatccattctgttccaaatctgcatgcccgtggccttcgagctgtg
gtgtacccagagtgcccagtagagccatccccatacatctatagatgtaatatcaaagga
tgttcacaagcagctacctggagagtgggaaagtggaccaagtgctcagtgtcttgtgga
gtggggatacaggagagaactgtagaatgtacaactgaaaatggcttatccagtgacttg
tgccagccacgtctaaaaccagatgccagaaagatctgccatggggaagaatgtgaaatt
tttaccacctgcaaagatatccagattaaaaaagggattagaaaggatggtgaataccta
cttaacattaagggacggatgataaagatttattgctcaggcatgcacttagagaatccc
aaagaatatttaacactggtaaaaggtgaagcagacaacttttctgaagtatatggatac
aggttgcagaatccatatgaatgtcctttcaatggaagcagaaggcaagactgtgcctgt
cgaaatgattaccttgcagctggcttcactgtttttagcaaaatcagatttgatgtagcc
tccatgcaaattaaaaccacagattttctttttgctcagactatacttgggagagcagtc
ccgtttgctacagctggagattgctacagtgctgccagatgtccacagggacagttcagc
attaatttggctgggacaggtctgagattatccagtacagttagatggattgctcagggc
aactatgcaacttctgacatacacaaatcacatgatggtactaaaatatatggaagatgt
ggaggattttgtggaaaatgtgttcctaactcaattattggtctccaacttcaaacacag
tga
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integrated database retrieval system
