Chaetura pelagica (chimney swift): 104396559
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Entry
104396559 CDS
T08631
Symbol
PCDH7
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104396559 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104396559 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104396559 (PCDH7)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104396559 (PCDH7)
Cell adhesion molecules [BR:
cpea04515
]
Cadherins
Protocadherins
104396559 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
LYRIC
KIAA1549
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
104396559
NCBI-ProteinID:
XP_010004716
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
LESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVIGPSQSWVDLF
EGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYELLQRLL
RLDEPSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIR
KIGRIPLRDGVASVTEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEG
EPQNKRKYFLHTSAPLDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPMFSQ
AVLEVSFPENNLPGERVATVVATDADSGKNAEITYSLEASPLSSEAPGGIFTIDPDSGDV
SVQAVLDREQRDTYEFLVTARDKGVPSLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKEN
LQPNSPVGMVTVMDFDKGRNAELSLSIQPSDHDQTAGIFSIENDTGTIFSTVSFDREQQT
SYTFKVKAVDGGEPPRSATATVSLFVMDENDNAPTVTFPSNSSYTVLPPSSNMRTVVATV
VATDADTGLNADLNYSIIGGNPFKLFEIDPASGVVSLVGKLAPKHYGLHRIVVQVNDSGQ
PPQSTTALLHVFVNESLSNATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVA
GIMTVILLILVVVMARYCRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQP
LYSSIVTVEASKPNGQRYDSVNEKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQ
LHPQSPTSGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFS
VVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAE
HMENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGS
QEKLANGEASLMGDRNRNLLNKKLTSSYETFSVASFSKNEEGNPEDIPLTQTGEYKPSPV
NTLTRREVYL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
ctggaatcgggctctgactatctcaagatcgataacatgaccggggagctgagcaccacg
gagcggcgcatcgaccgcgagaagctgccgcagtgccagatgatcttcgacgagaacgag
tgcttcctggacttcgaggtgtcggtcatcggcccctcgcagagctgggtggacctcttt
gagggccgggtcatcattctggacatcaacgacaacacccccaccttcccctcccctgtc
ctcacacttaccgtggaggagaaccggcctgtgggaaccctctacctactccccaccgcc
accgacagggacttcggccgcaacggcatcgagcgctacgaactgctacaacgcctgctg
cggcttgacgagccctccggctggctcagtgtcttgcatcgtattgaccgggaggaggtt
aaccagcttcgcttcactgtcatggctcgagatcggggccagccccccaagacagacaag
gccacagtcgtgcttaacatccgcgatgagaatgacaacgtgcccaccattgacatccgg
aaaattggacgcatcccactccgggacggggtggctagcgtgactgaggatgtgctggtg
gatacccctattgctctggtgcaggtgtcagaccgagaccaaggtgaaaatggtgtggtg
acgtgcactgtggtgggcgatgtgcccttccagctcaagcctgccagtgagggtgaaggg
gagccgcagaacaagcgcaagtatttcctccatacctcagcccctctggactatgaggct
gtccgcgactacaacgtggtgatcgtggcagtggactcaggcagccccagcttgtccagc
aacaactccttgctggtgcgggttggggacactaatgacaaccctcccatgttcagccag
gctgtgctggaggtctccttcccagagaacaacttgcctggcgagagggtggccacagta
gttgccacagatgcggacagtggtaagaatgctgagatcacctactccttagaggcctca
cccctctcctcggaggcaccgggtggcatcttcaccattgaccctgactctggggacgtg
tcagtgcaggcagtgctggaccgtgagcaacgtgatacctacgagttcctggtgacagcc
cgagacaaaggggtgccatcgctacagggctccactacagtggtggtgcgggtggcggat
cgcaatgacaatgagccacgcttcatgcaggatgtgttcactttctatgtgaaggagaac
ctgcagcccaacagccccgtgggcatggtgactgtgatggactttgacaagggccgcaac
gctgagctcagcctctccatccagcccagtgaccatgaccagacagctggcatcttctcc
attgagaatgacactggaaccattttctccactgtctcttttgaccgagagcagcagacc
agctacacttttaaggtgaaggcagtggatgggggtgaacccccacgctccgccactgcc
actgtgtccctgtttgtgatggatgagaatgacaatgctcccactgtcaccttccccagc
aacagctcttatactgtgctgccaccctccagcaacatgcgcaccgtggtggccacagtg
gttgccactgatgctgacaccggtctcaatgctgacctcaactacagcatcatagggggc
aatcccttcaaactctttgagatcgacccagccagtggtgtggtgtcactggtgggcaag
ctggcccccaagcactatggcctgcatcgcattgtggtgcaggtgaatgacagtgggcag
cctccccagtctactactgccctgctccatgtcttcgtcaatgagagcctatccaatgcc
actgtggtggaaagccaggtggcccgcagcctccacacacccctggcccaggacattgct
ggagaccccagctacgagctgagcaagcagcggcttagcatcgtcattggtgtggtggcc
ggcatcatgacagtcatcctcctcatcctggtggtggtcatggcccgctactgccgttcc
aagggcaaacatggctatgaggctggcaagaaggaccacgaggattttttcaccccgcag
cagcacgacaaggccaagaagcccaagaaggacaaaaaaggcaagaagggcaagcaacct
ctctacagcagcatcgtcaccgtcgaggcttccaagcccaatgggcagcgctatgacagt
gtcaatgagaagctctcggacagccctggtatggggcggtaccgctcagtcaatggtggc
ccaggcagccccgacctcgccaggcactacaagtcaagctcgccgctgcccaccgtccag
ctgcacccgcagtcccctacctctggcaaaaaacaccaggccgtgcaggacctgcccccg
gccaacacctttgtgggtgccggcgacaacatctccatcgggtcggaccactgctccgag
tacagctgccaggccagcagcaagtacagcaagcagccatttcgtagagtgacgttttct
gttgtgagtcagcctcaggacccacatcaagggtcattgcagagttgctatgacagcggt
ctggaggagtcagaaacaccaagcagtaagagttcatcagggccaagactgggtgccctt
ccactcccagaggacaactacgaaaggactacgccggatggcagtgttggtgaggcagag
catatggaaaatgattcaaggcctctaccagatgtagccctgacagggaagtgtacccga
gagtgtgatgaatacggccactcagactcctgctggatgccagtccgcacttctccggaa
agaaagcagaagagtcagccgaaactctccactttcatgcctgttgatgaacggggcagt
caggaaaagctggccaatggagaagcctccctcatgggtgatcgcaacagaaacctcctt
aacaaaaagttgacctcatcttatgagaccttcagtgtggctagtttcagcaaaaatgaa
gaaggcaatccagaagatatcccccttacacagacaggggaatacaagccatctcctgtc
aatactctaactagaagggaagtttacctgtag
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