Chaetura pelagica (chimney swift): 104396581
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Entry
104396581 CDS
T08631
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104396581 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104396581 (RAD54B)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104396581 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
104396581
NCBI-ProteinID:
XP_010004735
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MRRSAAPSQVLGNVAKKSRFIPPGKSLKNETKEMDQEKKLKEIDEKEGGALLLSKIYVQN
QNANFTHSVESTGKVKTTKPCFSINKCSKVEMKTFSTPKADALHLPASGTAKEEAAQEEP
DCSVKYFSVVWCKASKKKHKKWEGDAVLITKGKSVILKDMEGKDIGRGTGYKSKELDSLD
EGQTLMVGGKEVEVMGVISAEDFSSGRCFQCGIGTHDTVPAALSQTSMKPFSTQFKSVCQ
SSTREYMLKDSQSYKPRHDPNALNSLVMPRPNASHQWTFNKAGLPVVDVVVDPYIANNLR
PHQKEGIIFLYECVMGMRVSGRYGAILADEMGLGKTLQCIALVWTLLRQGAYGCKPVLKR
ALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVLIISYEMLLRSL
DQIEAIEFNLLICDEGHRLKNSSIKTTTVLSSLSCERRIILTGTPIQNDLQEFYSLIEFV
NPGILGSLSTYRKIYEEPIVKSREPSATKEEKELGEKRAAELTRLTGLFILRRTQEVINQ
FLPPKKENIIFCRPTALQLELYRKLLSSRAIRSCLQGRLENSPHLICIGALKKLCNHPRL
LFKAIKEKSCDPMSDEHDESSLYEGLIDVFPQDYTPDTFSETDSGKLQVLVKLLAAIHEL
SSSERVVLVSNYTQTLNILQETCKHYGYSYTRLDGNTPVSQRQQIVDTFNSKFSPAFIFL
LSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHTVYIYRLLTTGSIEEK
IYQRQISKQDLSGAVVDLSKTSEHIHFSIEELRNLFTLHEDSSCVTHDLLDCDCMGKKDH
QNSSSEKPSVSRSCQLGQNPGKPDSKKPLSMSQLMQWKHFSGQHQTLADPFLERIKENVS
FIFQNVTNPASPT
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatcagcagctccaagtcaagtgttaggaaatgtagccaaaaagtcaaggttt
ataccaccaggaaaaagtctcaagaatgaaactaaagagatggaccaagaaaagaaatta
aaggagatagatgagaaagagggaggtgctttattgctttctaaaatctatgtgcagaat
caaaacgcaaatttcacacactctgtggagtcaactggaaaagtaaagactacaaaacca
tgcttcagcataaataagtgtagcaaggtggaaatgaaaacattcagtacacccaaagct
gatgcactgcatttgccagcatcagggacagcaaaggaggaagcagctcaggaagaacct
gactgctctgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaaaagcacaag
aagtgggaaggcgatgctgttcttattacaaaaggaaagtcagtaatattgaaagatatg
gaaggcaaagacattggaagaggtactggatataaatctaaagagctagacagtcttgat
gaaggccaaacactgatggttggaggaaaagaagttgaagtgatgggtgtaatttctgca
gaagacttcagcagtggcaggtgttttcagtgtggaatagggactcatgacacggtccca
gctgctttatctcaaaccagtatgaagccattctctacacaattcaaaagtgtctgtcaa
tccagcactagagagtatatgctcaaagattctcaaagctacaaacctcgccacgatcca
aatgctttaaattctctagttatgccaagaccaaatgcaagtcatcagtggacatttaat
aaagctggtttacctgtggtggatgtagttgtggatccttacattgcaaataatctccga
ccacatcagaaagaaggaattatatttctatatgaatgtgtaatgggaatgagggttagc
ggcagatacggagctattcttgctgatgaaatgggcttaggcaaaaccttgcagtgcatc
gcgcttgtctggactcttctgcgtcaaggggcctatggatgcaaacccgtgctgaagcga
gcactaattgtcacccctgggagtctggtaaaaaactggaagaaagagtttcagaaatgg
ttggggagtgaaaggatcaaagtctttacagttgatcaggaccataaagtggaagaattc
atttcttctccactttattcagttttgataatcagttatgagatgctgctgcgatctttg
gatcaaattgaagctatagaatttaacctcctaatctgtgatgaaggacatcgtctgaaa
aatagctctattaagacaactacagttctcagtagtctgtcttgtgagaggagaattatc
cttactggtactccaatccaaaatgatttgcaagaattttattcattaatagagtttgtg
aatccaggaatacttggttctttatctacatatagaaagatttatgaggaaccaattgtc
aagtccagggaaccttcagcaacaaaggaggaaaaggaattaggagaaaaaagagcagca
gaactgacacgcctcactggactctttattcttaggagaacacaggaggttataaaccag
ttcctgccccccaaaaaggagaatataatcttctgccgaccaacagcactgcagctggag
ttgtatcgaaaattgcttagttctcgagctatcaggtcctgcctacaaggcaggctagaa
aacagtcctcacctcatttgtataggggctttgaaaaaactttgcaatcatccacgtctt
ctgtttaaagctataaaggaaaaaagctgtgatcctatgtctgatgaacatgatgagtcc
agtctctatgaaggtctaatagatgtctttccacaagattatacaccagacactttctct
gaaactgattcaggaaaattgcaggtgctggtgaagttattagcagcaatccatgagctc
agctcttctgaaagggtcgtactggtatccaattacactcaaacattaaacatactgcaa
gagacatgcaaacattatggatactcttatactagacttgatggaaatactcctgtctcc
cagaggcaacagattgttgatactttcaacagtaaattcagtccagcttttatctttttg
ctgagttcaaaggctggtggagtaggactgaatctggtcggcgcatcccatttgatcctg
tatgatatcgactggaatccagctacggatattcaggcaatggccagagtgtggagagat
ggtcagaaacacactgtgtatatctacagactgctaaccacaggctcaatagaagaaaag
atttatcaaagacagatcagcaaacaagacctttctggggcagttgtagacctttccaag
acatctgaacacatccacttctccattgaggagcttagaaatctctttacacttcatgaa
gactccagctgtgttacccatgacttgcttgattgtgactgtatgggaaagaaggaccat
caaaattcttcctcagaaaagccttctgtgtctagaagttgccagcttggacaaaacccc
gggaaacctgactcaaagaaaccactctccatgtcacagctgatgcaatggaaacatttc
tctgggcaacatcagactctagctgatcctttccttgaaaggataaaagagaacgtttct
ttcattttccagaatgtaaccaacccagcttcccccacctaa
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