Chaetura pelagica (chimney swift): 104396655
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Entry
104396655 CDS
T08631
Symbol
SDC2
Name
(RefSeq) syndecan-2
KO
K16336
syndecan 2
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04514
Cell adhesion molecules
cpea04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104396655 (SDC2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104396655 (SDC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cpea04090
]
104396655 (SDC2)
00535 Proteoglycans [BR:
cpea00535
]
104396655 (SDC2)
CD molecules [BR:
cpea04090
]
Proteins
104396655 (SDC2)
Proteoglycans [BR:
cpea00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104396655 (SDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Dsc3_C
Glycophorin_A
Cadherin_C_2
ATG22
Peptidase_M50
Glypican
Motif
Other DBs
NCBI-GeneID:
104396655
NCBI-ProteinID:
XP_010004816
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MVVDLPVGLQKEKKDLRKWRPVTRVKAEGPLSLGKRADLTSDKDLYLDNSSVEEASGVYP
IDDDDYSSGSGSGAEEDEDSAAITTSRTIPKLPTTSDASRAETTTVKMQTKVPAQTQSPE
EIDKEERPQTDAKKKSDEPGEDTDVFTEKHSENLFQRTEVLAAVIAGGVIGFLFAIFLIL
LLVYRMRKKDEGSYDLGERKPSCAAYQKAPTKEFYA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggacttacctgtgggactccaaaaagaaaagaaagatctgcggaagtggagg
cctgtcacaagagtgaaagcagagggaccactttcacttggaaaaagagctgatttgact
tctgataaagatttataccttgacaacagctctgttgaggaagcatcaggagtctatcca
attgatgacgatgattattcttctgggtcaggttcaggtgctgaagaggatgaggatagt
gcagcgataacaacatccagaacaattccaaagctaccgacaactagtgatgcatctagg
gctgagaccaccacggtgaaaatgcagaccaaggtgcctgcacaaacacagtcaccagag
gaaattgataaagaggaaaggccccagacagatgccaagaaaaagagcgatgaaccaggg
gaagacacggacgtgttcactgagaagcattcagaaaaccttttccagagaacagaagtt
ctggcagctgttattgctggcggagttatcggttttcttttcgcaatcttcctcatcctg
ctgctggtctatcgcatgagaaagaaggatgaaggcagttacgaccttggtgaacgtaaa
ccatcctgtgctgcctatcaaaaggcacctaccaaggagttttatgcataa
DBGET
integrated database retrieval system
