Chaetura pelagica (chimney swift): 104396662
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Entry
104396662 CDS
T08631
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03030
DNA replication
cpea03410
Base excision repair
cpea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104396662 (POLE)
03410 Base excision repair
104396662 (POLE)
03420 Nucleotide excision repair
104396662 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpea03032
]
104396662 (POLE)
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104396662 (POLE)
Enzymes [BR:
cpea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104396662 (POLE)
DNA replication proteins [BR:
cpea03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104396662 (POLE)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104396662 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
FIIND
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
IntS14_b-barrel
Motif
Other DBs
NCBI-GeneID:
104396662
NCBI-ProteinID:
XP_010004826
LinkDB
All DBs
Position
Unknown
AA seq
2313 aa
AA seq
DB search
MQEHVMVHEGTSAADGIRKAEGMLLEDGFFSQIVHLPGKGIFQCSITGLGFEVKSAVTIT
YRFATWTRHLSKADQEVWMPIGPLFHIKVQPEVQTEVLDEDRRSMSAVDYYFIQEDGNRF
KVALPYKPYFYIATQKGCEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIK
LSFNTVDDLVKVRKEISPAVRKNRERDQASDVYTAMLSSALSGGSLSTEEEGPSRKVASQ
MDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTFPPEITRRDDLVERPDPVVLAF
DIETTKLPLKFPDAETDQIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCV
FNEPDEAHLIQRWFEHVQETKPTIIVTYNGDFFDWPFVEARAAAHGIDMYQEIGFQKDSQ
GEYKASQCIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPVELDPEDMCRMATEEPQT
LATYSVSDAVATYYMYMKYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANI
IFPNKQEQEFNKLTEDGHVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHV
EKTLRHAIEEEEGLPLDQVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNI
ILTNRLQPSAMVDEATCAACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEK
FPPLSPEGAPRAFHELSREEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFY
VDTVRAFRDRRYEFKGLHKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNS
FYGYVMRKGARWYSMEMAGIVCFTGASIITQARELIEQIGRPLELDTDGIWCVLPNSFPE
NFVITSTNAKKPKVTISYPGAMLNILVKEGFTNDQYQELQDPASLTYVTRSENSIFFEVD
GPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFL
KGSTLEEVYASVAKVADYWLDVLYSKADNMPDSELFELIAENRSMSRKLEDYGEQKSTSI
STAKRLAEFLGDQMVKDAGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWL
KSPSLQDFNIRAILDWDYYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEK
NDVYKQKKINELFTSEGKRQVLTNQPPEGMSSSQIGDIEDLGAAKTLQPLLPITKKRKRV
SASEKSQQMSQYLELSQSWREILGPPPALGTTKEEQLIWLRYHQKKWELQARQRRERQKR
RRLEDGEVGAGGGVVRDTLSRGLSSYLRRTARSILDLPWQIVQIAETSQPGQFRLWALIG
SDLHCIRLNIPRVFYVNQRIPKPEEGTAYRKVNRILPRSNVVYNLYEYSVPEDMYQEHIN
EINADLSAPDIEGVYETQVPLLLCALIHLGCVCMVSRQLVRHLAGREADTFDIEHLEMCS
LAQFTYLEPGSIRHIYLYHSSQGSRALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSA
EHQALLGKVGKELLPPDKHTFEVRAETDPKAIYRAVQRLLLGYKDERRGPTLIAVQSNWD
LKRLSSGIPIIEEFPLVPIRLVDDISYSVLDWQRHAARRMIRHYLNLDTRLSQAFEMSRY
YHVPIGNLPDDISTFGSDLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMELDERA
SVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGGSSMSISFDVIQQASLEDMVTG
NQAANIPASYDETALCSNTFRILKSMVVSWVKEITQYQNVYADNQVIHFYRWLRSPSSLL
YDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIIN
SIHSKEIFHSLTISFSRCWEFLLWMDPANYGGIKGKVNSRIHYGEDTSKRQVLEEEASED
EEEEVATGEEEEEEGEPNVEEMLENSWNIMQFLPQAASCQSYFLMIVSAYIVAVYHSMKE
ELRCNTPGSTPVKRRSTSQVFQEALGEVGAMPGMITFSQDYVANELTQSFFTITQKIRKK
MAGSRNATEPSDMFPVLPGSHLPLNNPALEFIKSVCKVLSLDTNITNQVNKLRRDLLRLI
EVGEFSEEAQFRDPCRSYVLPEVICRNCNFCRDLDLCKDPVFSQDGSVLPGWICSNCQAQ
YDSDAIEAALVEALQKKLMAFMLQDLECQKCHGVKEMHMPVYCSCAGDFALTMSSQTFME
HIRVFQNIARHYGMAYLLETTEWLLHTNPLLHH
NT seq
6942 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcatgtgatggtacatgaggggaccagtgcagctgatgggatcaggaaggct
gagggaatgctgcttgaagatggcttcttctcccaaatagttcacctccctggtaaagga
atcttccagtgctccattacaggcctcggctttgaggtgaagtcagcagtgaccatcacc
tacaggtttgccacctggaccaggcacctgagcaaggctgaccaggaagtatggatgccc
attggacccctcttccacatcaaggtgcagcctgaggtgcagacggaagtgctggacgag
gaccgacggtccatgagcgctgtggattactactttatccaagaggacgggaaccgcttc
aaggtggccctaccctacaagccctacttttacatcgcaacccagaagggctgtgagcgg
gaagtgtcctctttcctctccaagaagttccaagggaagattgcaaagctggagactgtc
cccaaggaagacttggacctgccaaaccacttggtgggcctgaagaggaactacatcaag
ctgtccttcaacacggtggatgacttggtgaaggtgcggaaggagatctctcctgccgtg
aggaaaaacagggagcgagaccaggccagcgatgtctacacggccatgctatcaagcgca
ctgagtgggggcagcctcagcacggaggaggaggggccctccagaaaggttgccagccag
atggacaacattgtggacatgcgggagtacgacgtaccctaccatgttcgcctctccatt
gacctgaagatccatgtggctcactggtacaatgtgcggtatcggggcagcaccttcccc
cctgaaatcacacgccgagatgacctggtggagcgaccggatcctgttgttctcgccttt
gacattgaaactaccaaactccctttgaagtttcctgatgcagagacagaccagatcatg
atgatctcctacatgattgatgggcagggctacctgatcacaaacagggagatcgtctct
gaggatattgaagacttcgagtttactcccaaaccagagtatgagggtccattttgtgtc
tttaatgaaccagatgaagctcatttaatacagaggtggtttgaacatgtccaggagact
aaacccaccatcattgtcacatacaatggagacttctttgactggccctttgtggaagca
agagcagcagctcatggaattgatatgtaccaggaaattgggtttcagaaggacagccag
ggagagtacaaagcatcccagtgcatccacatggactgtctaaggtgggtgaagagagac
agttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaactgggttat
gaccctgtggagctggaccctgaagacatgtgccggatggctacagaggagccccagacc
ctggccacctattccgtgtctgacgcagtcgctacctattacatgtacatgaagtacgtg
caccctttcatctttgccctgtgcaccatcatccccatggagcctgatgaggtgttaagg
aaaggatctgggacactgtgtgaggcactgctgatggttcaggcctatcatgccaacatc
atcttccccaacaagcaggagcaggagttcaacaagctcacagaagatggccacgtgctg
gactcggagacctatgtgggaggccatgtggaagcgctggagtcgggggtcttccgcagt
gacatcccatgccgcttcaaaatgaatccagctgcctttgacttcctggtgcagcacgtg
gagaagacgctgcggcacgccatcgaggaggaggagggcttgccactggaccaggtcacc
aactttcaggaggtttgtgatgaaatcaaggtcaaactgaattccctgaaagatgttccg
aacagaattgagtgtccccttatctaccatctagatgtgggggccatgtaccccaacatc
attctgaccaacaggctgcagccctcagccatggtggatgaggccacgtgtgctgcctgt
gacttcaacaagccgggtgccaactgccagcgccggatgacatggcagtggagaggagag
ttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggagtcagagaag
ttccctcccctgtcccctgagggagcaccccgtgccttccatgagctttcccgggaagaa
caagccaagtatgagaagaagcggctagcagattactgccgcaaggcatacaagaagatt
catgtcacaaaggtggaggaacgagtcaccaccatctgccagcgagagaactctttctat
gtggacacagtgcgggctttccgggaccgccgctacgagttcaagggactgcacaaggtg
tggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtgaagcgctgc
aagaacatggaaatcctgtatgactccctgcagttggcccacaagtgcatcctcaactct
ttctatggctatgtcatgcggaaaggagctcgctggtactccatggagatggctggcatt
gtctgcttcacgggagcgagtatcatcacccaggccagggagctgattgagcagatcggg
agaccactggaactggataccgatgggatttggtgtgtccttcccaacagcttcccggag
aactttgtcatcacgtcaaccaatgccaagaagccaaaagtgacaatctcctacccgggt
gccatgctgaacatcctggtgaaggaaggcttcacgaatgatcaataccaggagctgcag
gacccagcctctctcacctatgtcacacgctcggagaacagcatcttttttgaagtggat
ggaccatacctggccatgatcctcccagcttccaaggaggagggcaagaagctgaagaaa
aggtatgcagtgttcaatgaagatgggtccctggctgagctgaagggatttgaggtgaag
cgccggggagagctgcagctagtgaagatcttccagtcctctgtatttgaagcctttctg
aaaggcagcaccctggaggaggtctatgcttctgtggccaaggtggctgattactggctg
gatgtgctctacagcaaggctgacaacatgccagattcggagctgtttgagctgattgca
gagaaccggtccatgtcgcgcaagttggaggactacggggagcagaagtccacctccatc
agcactgctaagcgcctggcagagttcctgggggaccagatggtgaaggatgcaggactg
agctgccggttcataatttccaagaaacctgaagggtctcctgtcactgagagggccatc
cccctcgccatcttccaagccgagcccagcgtgcgcaaacactacctccgaaaatggctg
aagagcccctcactgcaggatttcaacatccgtgcgatcctggactgggactactacatc
gagagactgggcagcaccatccagaagatcatcaccattcctgcagccctgcagcaggta
aagaacccagtgccacgggtcaggcacccagactggctccacaagaaactcctggagaag
aatgatgtgtacaaacagaagaaaatcaatgagctcttcacctcagaaggcaagagacag
gtcctcaccaaccagcccccagaaggaatgtctagctcacagattggtgacatagaggac
ttgggggctgccaaaacccttcaaccactgcttcccatcacgaagaagcggaaacgagta
tctgcatcagagaaaagccaacagatgtcccagtacctggagctatcccagtcctggcga
gagatcctgggtccacctccagccctgggcaccaccaaggaggagcagctgatctggctg
cgctaccaccagaagaagtgggagctgcaggctcggcagcggcgggagcggcagaagagg
cggcgtctggaggacggtgaggtgggagcaggtggaggagtggtccgtgacaccctctcc
agagggctgagcagctacctgcgcaggaccgcccgcagcatcctggacctgccctggcag
atcgtgcagatcgccgagaccagccagcctgggcagttcaggctgtgggcactgattgga
agtgatctgcactgcatcaggctgaacatcccccgggtcttctatgtcaaccagcgcatc
ccaaagccagaggagggaacagcctacaggaaggtgaacaggatcctaccccgctcaaac
gtagtgtacaacctgtatgaatactccgtccctgaagacatgtaccaagagcacatcaat
gagatcaacgcagacctctctgccccggacatcgagggggtgtatgagacgcaggtgcca
ctcctcctctgtgccctgatccacctgggctgtgtgtgcatggttagcaggcagctggtc
aggcatctggcagggcgagaggccgacacctttgacatcgagcacctggagatgtgctca
ctggcccagttcacttacctggagccaggaagcattcgccacatctacctctaccacagc
tcccagggcagcagggcgctcctaggcctcttcatcccctcccagcgcaaagctgctgtc
tttgtgctggacaaggtccgcagcaaccagatgccaaatctcaccaccctcttctcagcg
gagcatcaggcgctgctgggaaaggtgggcaaggagctgctgcccccagacaagcacacc
ttcgaagtgcgtgctgagactgaccccaaagccatctacagggctgtccagcggctgctg
ctgggctacaaggatgagcgccggggccccacgctgattgctgtgcagtctaactgggac
ttgaaacgcctgtcaagtgggatccccatcatcgaggagttccccttggttcctatccgg
ctggtagatgacatcagctactcggtcttggactggcagcgccatgctgcccgccgcatg
atccgtcactacctcaacctggacacccgcctctcccaagctttcgagatgagcaggtat
taccacgtccccattggcaacctccctgatgacatctccaccttcggctctgaccttttc
ttctcacgccacctccgtcgtcacaaccacttgctgtggctctcgcccacagcccgccca
gacctggggggtaaggaggccgatgacaaccgcttggtcatggagttggatgagagagcc
tctgtggagataaacaaccccggctgctactccaccgtgtgtctggagctggacatccag
agcctggctgtaaacacggtcttacaatcccaccacatcaacgacatggaaggaggctcc
agcatgagcatcagctttgatgtgattcagcaggcatccttagaagacatggtaacaggg
aaccaggctgccaacatcccggccagctatgatgaaactgccctctgctccaacactttc
aggatcctgaagagcatggtggtgagctgggtgaaggagatcacacagtatcagaacgtc
tacgccgacaaccaggtcattcacttttaccgctggctccgctctccttcctccctgctc
tatgacccggcgctgcaccgcacgctccacaacatgatgaagaagcttttcctgcagttg
gtggctgagttcaagcgtctgggctcctcggtggtttacgcaaacttcaaccgcatcatt
ctgtgcaccaagaagcggcgcattgaggacgccatcagctacatggagtacatcatcaac
agcatccattccaaggagatcttccactctctgaccatctccttttcccgctgctgggag
ttcctgctctggatggatccagcaaattatggaggtatcaagggaaaagtgaattctcgc
atccattacggggaggacaccagcaagaggcaggtgttggaggaggaggccagcgaggat
gaggaggaggaggtagccacaggggaagaagaggaggaggaaggggagccaaatgtggag
gagatgctggagaacagctggaacatcatgcagttcctaccccaggccgcctcctgccag
agctacttcctgatgattgtgtcagcctacattgtggctgtgtaccacagcatgaaggag
gagctgcggtgcaacactcctgggagcacccctgtcaagaggaggagcaccagccaggtg
ttccaggaggccctgggggaggtgggggccatgcccggcatgatcaccttctcacaggat
tatgtggccaatgagctcacccagagcttcttcaccatcacccagaagatccggaagaag
atggctggttctcgtaatgccactgagccttcagacatgtttccagtgctgcctggctcc
cacttgccactcaacaacccagctctggagttcataaaaagtgtttgcaaggtcctctcc
ctggacaccaacataaccaaccaagtgaacaaactgcgccgggacctgctgcgcctcatc
gaggtgggcgagttctcggaagaagcccagtttcgggacccttgccgctcctacgtgctc
cctgaagtcatctgcaggaactgcaacttctgcagggacctggacctgtgcaaagaccct
gtcttctcccaggatgggtcagtgctacctggctggatctgctccaactgccaggcacag
tacgactctgatgccattgaagcagcactggtggaagccctgcagaagaagctgatggcc
ttcatgctgcaggacctggagtgccagaagtgtcatggcgtgaaggagatgcacatgcct
gtgtactgcagctgtgctggagactttgccctcaccatgtcctcccagaccttcatggag
cacatcagggtctttcagaacatcgcccgacactatggcatggcctacctgctggaaacc
actgagtggctgctgcacaccaaccccctgctccaccactga
DBGET
integrated database retrieval system
