Chaetura pelagica (chimney swift): 104396671
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Entry
104396671 CDS
T08631
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpea03009
]
104396671 (DCAF13)
04121 Ubiquitin system [BR:
cpea04121
]
104396671 (DCAF13)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
90S particles
Other 90S particles
104396671 (DCAF13)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104396671 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
KNTC1_N
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
104396671
NCBI-ProteinID:
XP_010004832
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MLVLQKTLPWQENQRYKLSYSAYLELHYTPRVYNVCLILIAVPRNYDPILHPFEVPREYT
RALNATKLERVFAKPFLGSLDGHRDGVNCIAKHPKSLSTVLSGACDGEVRIWNLTKRQCI
RTIQAHEGFVRGMCARFCGTSFFTVGDDKTVKQWKMESPEYGEEEEPIHTILGKTVYTGI
DHHWKEAVFATCGQQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIV
LYDMRKSTPLKKVILNMRTNALCWNPMEAFVFTAANEDYNLYTFDMRYLESPMVVHMDHV
SAVLDVDYSPTGKEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDSKYILC
GSDEMNIRLWKANASEKLGVLAPREKAAMNYNQKLKEKFQYHPKIRRIAQHRHLPKSIYC
QIKEQRIMREARRRKELNRRKHSKPGSMPFVSERKKHIVAVVK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgttgcagaaaactctcccatggcaggaaaatcaaagatacaagctttcttat
tcagcttaccttgaactacactacacaccacgagtttataatgtctgtctcattcttatt
gcagttccaagaaactatgaccctatattgcatccatttgaggttccacgggagtacaca
agagctctaaatgcaacaaagcttgaacgtgtgtttgcaaaaccctttcttggctcactt
gatggccacagagatggagttaattgcatagccaaacatccgaagagtttgtctacagta
ctgtctggagcttgtgatggagaggtcagaatttggaacttgaccaaacgacagtgcatt
cgtactatacaagcccatgaaggctttgttcgaggcatgtgtgctcgtttctgtggtaca
tcattctttactgttggtgatgacaaaactgtgaagcagtggaaaatggaaagcccagaa
tatggagaagaagaagaacctattcatacaattcttggaaagacagtgtatacaggaatt
gatcaccactggaaggaagctgtttttgccacctgtggccagcaagtggacatttgggat
gagcaaaggacaagtcccatgtgttctctgacatggggttttgatagcataagcagtgta
aaatttaatcccattgagacatacctcttgggaagctgtgcttctgacagaaatattgta
ctatatgatatgagaaaatcaactccgttaaagaaggttatcttgaacatgaggacaaat
gcactgtgttggaaccccatggaagctttcgtttttactgcagcaaatgaagattacaac
ctatatacttttgatatgcgctacctggaatcacctatggtggtgcatatggatcacgtg
tctgctgtcctcgatgtggattattcacccactgggaaagaatttgtctcagccagcttt
gataagtctgtccgcatttttcctgtagacaaaggtcacagcagggaggtgtatcatacc
aagcgaatgcagcatgtcatcactgtaaaatggacttcagatagcaaatatattctgtgt
ggctcagatgagatgaatattcgtctgtggaaagctaatgcttctgaaaagttgggagtg
cttgcaccacgagagaaggcagctatgaattacaaccagaagctgaaggagaagttccag
tatcacccaaagatcagacgcatagctcagcaccgtcacttgcctaaaagcatatattgc
caaatcaaggagcaacgaatcatgagagaagctcgtcggcgaaaggaactgaatcgtcgt
aagcacagcaaaccaggatctatgccgtttgtttcagagcggaagaaacatattgtggca
gtagtaaaataa
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