Chaetura pelagica (chimney swift): 104396829
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Entry
104396829 CDS
T08631
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104396829 (FUBP1)
03041 Spliceosome [BR:
cpea03041
]
104396829 (FUBP1)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104396829 (FUBP1)
Spliceosome [BR:
cpea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104396829 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
104396829
NCBI-ProteinID:
XP_010005029
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MSLKTIAAKIGGDAGTSMNSNDYGYGGQKRPLEDGDQPDAKKVAPQNDSFGNQLPPMHQQ
QRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPES
VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAG
VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVPIPRFAVGIVIG
RNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPG
GPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIEL
QRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGP
PGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTD
PNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYK
KMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQGQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgaagacaattgcagcaaaaattggaggagatgctggtacctcaatgaattca
aacgactacggttatggagggcaaaaaagacctcttgaggatggagatcaaccagatgct
aagaaagtcgctcctcagaatgactcttttggaaatcaactaccaccgatgcatcaacaa
caaaggtctgtgatgacagaggagtacaaagttccggatgggatggttggattcataatt
ggcagaggtggagagcagatctcacgtatacagcaagagtctggctgtaaaatacagatt
gcacctgatagtggaggcctgcctgaaagatcatgtatgctaactggaacaccagagtct
gttcaatcagcaaaaaggttacttgatcagatagttgaaaagggaagacctgcccctggc
tttcatcatggtgatggacctggaaatgcagtccaagaaatcatgattccagcaagtaaa
gcaggtttagttattggaaaaggtggagagacaattaaacagttacaggagcgggcaggt
gtcaaaatggttatgattcaagatggtccacagaacactggtgcagacaagccccttagg
ataactggagacccttataaagttcaacaagccaaggaaatggtgctggagttaattcgt
gatcaaggtggctttagagaggttccaataccacgatttgctgtaggtatcgtaattgga
agaaacggagaaatgataaaaaagatacagaatgatgctggtgttaggatccagtttaag
cccgatgatggaacaactccagaaagaatagcccaaatcacagggcctcctgacagatgt
cagcatgctgcagaaattattacagatctccttcgaagtgttcaggctggtaaccctggt
ggaccaggacctggtggtagaggaaggggtagaggccaaggcaactggaacatggggcct
cctggtggattacaggagttcaattttattgttcccactggcaaaactggattaatcatt
ggcaaaggtggtgaaactattaaaagcataagccagcagtctggtgctagaatagaactt
caaagaaatcctccacctaatgcagatccaaacatgaagatgtttactatccgtggaaca
ccccagcaaatagattatgcacgacaacttatagaagaaaagattggaggtccagtaaat
ccattgggtccacctgttccccatggaccccatggcgttgttcctggcccacatggacct
cctggaccaccaggtcctggtgctcccatgggaccatataacccagctccttataatcca
gggcctcctggccctgcacctcatggtcctccagctccatatgctccacaaggatgggga
aatgcttatccgcactggcagccacctaatccaccagatccaggtaagccggggacagat
cccaattcagcagcatgggcagcttattatgctcactactatcagcagcaagcacagcca
ccacctgcagcccctcctggtggaccagctacaacccaaactaatggacaaggagatcag
ccaaatccagcaccagcagggcaggttgactataccaaggcctgggaggagtactacaaa
aaaatgggtcaagcagttcctgcccctgctggggctcctccaggtggtcagccagattac
agtgcagcatgggctgagtactacaggcaacaggcagcatattacgcccagacaagtcca
cagggaatgccacagcatcctccagcaccacagggccaataa
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