Chaetura pelagica (chimney swift): 104396904
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Entry
104396904 CDS
T08631
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104396904 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpea01009
]
104396904 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104396904 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cpea03029
]
104396904 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cpea01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104396904 (RB1CC1)
Membrane trafficking [BR:
cpea04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104396904 (RB1CC1)
Mitochondrial biogenesis [BR:
cpea03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104396904 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
104396904
NCBI-ProteinID:
XP_010005111
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSAEHEGAESEETEDGKSA
ELVLHSDISKANSKSMLASFCKSVEHSALEGTDPENAKDDKESGQNTTVQDSEKSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
ATGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPHLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENLVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTNACVKDTSAEKAPLSVCVEKCKVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINQLLEDGEESEKKIKKL
KGDLLGLEEVLQNKNDEFAMVKNEKEAVVCLQNEKDQKLLELECQMETQNCEIKELRQSR
EIVLEDLKKLHVESNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHNDCLD
KLKKENQHRLEQMQESHAVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIEKLNNKIQSNSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKVTVLHQKTSEAEKRLSEQITELQSKLELEANALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSSQEQDRQLLIQKLNCEKEDAVQTACKEFELQR
QAAEKGLLEKIQQLEMQINQSPPIESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKESIINDLSDKLKILTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYSAAASEACGACAADIPTDTDRLVSDIAAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactactcttacctttgatacggaactt
gctgtacaaaacgtggctgatctgaaacatgcaattcaaaccaagtataagattgccatt
cagcaccaagtgctggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagataccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaacgagatggagttg
aaagtagaagagtctctcatgatgcctgcagtgtttcatacggtagcgtcacggacacaa
cttgcagtggaaatgtatgaagttgcaaagaaactttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatattcttatcaaaagctgcttttcaagtttgaaaatgtatactcaagctatttgcag
tccatagatgatatcaagttgaaacttacacacttgggttctgctgtttctattatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaagattg
gattcttcagctgagcatgaaggggctgaaagtgaagaaactgaggatgggaaatctgct
gaattggtgcttcattctgatatatctaaagcgaacagtaaatccatgttagcctcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgcaaaagatgat
aaggaatctggtcaaaatactactgtccaggacagtgaaaaatcagtagaattgaaagac
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatcactggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccagccctttctggcagaatgtcgacaaactattgccaaactagataatcagaac
atgaaggctattaaaggccttgaggataggctctatgcattggaccagatgatagcaagc
tgcagcagacttgtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgttgcctgatctgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataacctacaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaggatggagagaaactacaagcattacttcgtcttgtaacagaa
ctcctagaaagggtcaaggttgtagaggctctcagtaccgttcctcagatgtactgtcta
gctgttgtagaggttgtgaggagaaaaatgtttataaaacactacagggagtgggcaggt
gctttaataaaagatggaaagcatctatatgaagctgaaaaggcgaaaagggaatctttt
ggtaaactcttcaggaagtcctttctaaggaatcgtttgtttagagggcttgactcctgg
cctccatccttttgtacacggaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtcgttttgtccttcagaagtacagccattactcagg
gttcctatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcgcaaacaattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcaccacaatctgctaccacaccaaggatggaaagt
gcaacaggaaccgcaattgctacctcttcaagaactcctccatcgctcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattggaagaattgtctccagacagcatt
gatgctcacacatttgattttgaaactattgctcatcctcacttggagcaagcacttaag
caaggatcattagacttggattcattagcagaaagtccagagtctgacttcatgtcagca
gtaaatgaatttgtaatagaagaaaatctagtatctcctaatgtaataagtgatccacaa
agtccagaaatgatggtggaatcactttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaaatgcttgtgtaaaggacacttcagcagaaaaggcacctctcagt
gtttgcgtggagaagtgtaaggttattgcccaagactcaaaggtacatttaagaggtata
aaagaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgcacttcattagaaatagtaaatactattgagaaggtaaaactttcactt
gaaaaaacactaaaagataaacatcaaaaagaattacagtctttgaaaagtgaatatgaa
acaaaaattaatcaattattggaagatggtgaagaaagtgaaaagaagattaaaaagtta
aaaggtgacttattaggccttgaggaagttcttcagaataagaatgatgaatttgcaatg
gtgaaaaatgagaaagaagctgtagtttgccttcagaatgaaaaagatcagaaattactt
gaattggaatgccaaatggagacacaaaattgtgaaattaaggaactgagacagtcacgt
gagatagtacttgaagacttgaaaaaacttcacgttgaaagcaatgaaaaactacaactc
ttgagggcagaactcgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtgctagctgagcacaacgactgtttagat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgcagtagtt
atgcaagagaagcaacaacaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgctctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagaaactttaaaatctcagattgataag
gaaactgaaagcttaaaaaaggagatagaaaaattaaacaataaaatacaaagtaacagt
gatgaatatcaagtgggcttatcggaattaaggactctgatgacaattgagaaagatcag
tgcatttctgaactggtagacagatatgaagaagaatcaaatttgcttagaacggaacta
aataaagtaacagttcttcatcaaaaaacttctgaggcagaaaaaagactttcagagcaa
ataacagaactgcaaagtaagttagagttggaagcaaatgccctagaaaaggaaaaaaca
gaaaaattgtctctgtgtgagcagcaggaaaaatacgaagctattatccataagcttaaa
gaagagaaagaactgttagtatcttcccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagtttgaattacagagg
caagctgctgaaaagggacttttggaaaaaatacaacaacttgagatgcaaataaatcag
agtcctcccattgaatcatctgctgaatcaagcttagttgctgaacttcaagagaagctt
caggaagaaaaaatgaaattcttagagcaacttgaagaacaagagaagagaaagaacgaa
gaaatgcagaacatcagaacatcacttacagcagaacagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaagcataatcaatgatcttagtgacaaattaaaa
atacttactcaacagcaagaaaaagataaggatttgattgagacactttctgaagatcga
gctcgcttacttgaagagaagaaaaagcttgaagaagaagttaataaactgagaagtagt
aatttttctccatcaacctactcagcagcagcttcagaagcctgtggagcctgcgcagct
gatattcccactgacacagacagactggtttctgacattgcagcagaaggaagaatggac
tccacgatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaaa
cagaggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaatt
gcaattagagattttcaggttggcgatttggtcctcattatcttggatgaaaggcatgac
aactatgtattgtttactgttagtccaaccttgtatttcttgcactcagaatctcttgct
gcgctggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtacta
ggaaaagtaatggaaaaggaatattgtcaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaggcagtgccatggaacaagaaagtataa
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integrated database retrieval system
