Chaetura pelagica (chimney swift): 104396991
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Entry
104396991 CDS
T08631
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104396991 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpea03021
]
104396991 (TAF4B)
03036 Chromosome and associated proteins [BR:
cpea03036
]
104396991 (TAF4B)
Transcription machinery [BR:
cpea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104396991 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
104396991 (TAF4B)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104396991 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
104396991
NCBI-ProteinID:
XP_010005205
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MVVLVVDSSASATESKGGTVLIRSSNGQLMLVSQQAVSQAQSQPQNNTSVRPSVPTSTPT
IRICAVQNSGTQILQKVAATPVKTLSQTANAVASTVQPPAIVQPTAATASVTTVTAVKPS
STGTPVKLPVTGPPAQAVSQKAVSVKAEGTTVAPTSTSTEMLENVKKCKNFLATLIKLAS
SGPQASEMGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPYLVPFLKKSLLALRQLM
PNAQSFIQQCIQQPAPTQDAVSTSTSAAPASSIAVATSAVATTSLPVIKPVSDTVTVPAS
PVIKPVLVSTSATGSLHTVKPVPASTVVTASLRPAASVLTTTIATSGLTAIQTVRPAFTS
AVAASSLQSAKPLLVSPVASPATTPLQPLKSAIGAPFGFKISQPKSVVAQSVGAQQVVKV
KQLVVQQPSGTVVKQVSTLPQPSIQTLQTPAEKRMPLNTLVQTSQFPAGSILKQITLPGH
KILSLQASPVQKAKIKENGATSFREEDEINDVTSMAGVNLKEENACIWATNSELIGTVIH
SCADEPFLFPEALQKKILNIGRRHDIMELNSDVVNLISHATQERLRGLLEKLTVIAQHRV
STHKGSDNYIISSDTRAQLRFLEKLDHLEKQRKDEEEREMLLRAAKSRSNKEDPEQLRLK
QKAKEMQQLELAQMQQREANLTALAAIGPRKKRPLDLSNVGSGLEDLKGSGIAPGSSGFS
LTKQLLCPRITRVCLRDLIFCMEQERDMKHSLTLYRALLK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggtggttttagtggtggactcttcagcatctgctacagaaagtaaaggaggaactgtt
cttatcagaagcagtaatggccagctaatgctagtatcccaacaagcagtatcacaagca
cagagtcagccacaaaataacacaagtgtgagaccatctgtaccgaccagcacacctaca
atcaggatatgtgctgtgcagaactctggcacccagatactacagaaagttgcagctact
cctgtgaaaacattatctcaaacagcaaatgctgtagcttctactgttcagccacctgct
atagtacagccaacagctgcaacagctagtgttaccacagttactgctgtaaagccttcg
agtactggaacacctgtaaaacttccagttacaggaccacctgcacaagctgtctcccaa
aaggcagtctctgtgaaagcagagggcacaacagtagcaccgaccagcacttctacagag
atgttagagaatgtgaagaaatgcaagaattttcttgctacactaataaaattggcatct
agtggacctcaagcttctgagatggggcagaatgtgaagaatcttgtgcaaaatttattg
gaagcaaaaattgaaccagaagaatttacaaaaaagctatacatagagctcaagtcatct
ccacaaccgtatttagttccttttctcaagaaaagcttacttgccttacgacagctaatg
cccaatgctcagagctttatccagcagtgtatccagcagccagctccaacccaagatgcc
gtttctacttctacctctgcagcaccagcttcttcgatagcagtggcaacctcagctgta
gcaacaacctctcttccagttataaaaccagtgtctgacactgtaacagtcccagcctct
ccagttataaagccagtccttgtcagtacgtcggcaacaggttctctgcacactgtgaag
cctgttcctgcctccacagtggtcacagcatctcttcgccctgcagcttcagtcctcacc
acgacgatagccacatcagggctgactgctatccaaactgtcaggccagccttcacttct
gcggtagcagcgtcctctctccagtccgcaaagccactactagtctctccagtggcatct
ccagcaacaacccctctccagcctctgaaatcagccattggagccccattcggtttcaaa
atctcgcagccaaaatccgtcgttgcacagtcagtaggcgctcagcaggtggttaaagtg
aaacagttggtagtccagcaaccatcaggaactgttgtaaagcaggtatccacactccca
caaccctcaatacagaccctacagacacctgctgagaagaggatgccactgaatacactt
gttcaaactagccagttccctgcaggttccattctgaaacagattaccctgccaggacat
aaaattctgtcgcttcaagcatctcctgttcagaaagctaaaataaaagagaatggagca
acctccttcagggaggaagatgagataaatgatgtgacttctatggctggggtcaatctt
aaggaggagaatgcatgcatttgggcaacaaactctgagcttattggtacagtgatccac
tcctgtgcagatgaaccttttctcttccccgaagcacttcagaagaagatcttgaacata
ggtagaaggcatgacattatggaacttaactctgatgttgtgaacttgatctcccatgct
acacaggagagattacgagggctcctagaaaaactaactgtaattgctcagcacagggta
tcaacccacaaggggagtgataactacatcatatctagtgacaccagagcacaactgaga
tttcttgaaaagctcgatcacctagaaaagcagagaaaggatgaagaggaacgtgaaatg
ttgcttcgagcagccaagagccgttccaataaagaggatcctgagcaactgcggttaaag
cagaaagcgaaagagatgcaacaattggagttagcacaaatgcaacaaagagaagccaac
ctcacagctttggcagccattggaccaaggaagaagagaccactggatttgtccaacgtt
ggatctgggttagaggatttgaaaggcagtgggattgctcctggatcatcaggttttagc
cttacgaaacagctgctctgtccaagaataacccgcgtctgtctcagggacttgatattc
tgcatggaacaagagagggatatgaagcattctctaaccttgtaccgtgctcttctgaag
tga
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