KEGG   Chaetura pelagica (chimney swift): 104397310
Entry
104397310         CDS       T08631                                 
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03018  RNA degradation
cpea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104397310 (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104397310 (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpea03019]
    104397310 (LSM7)
   03041 Spliceosome [BR:cpea03041]
    104397310 (LSM7)
Messenger RNA biogenesis [BR:cpea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104397310 (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104397310 (LSM7)
Spliceosome [BR:cpea03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    104397310 (LSM7)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 104397310
NCBI-ProteinID: XP_010005564
LinkDB
Position
Unknown
AA seq 100 aa
KEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYK
LTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 303 nt   +upstreamnt  +downstreamnt
aaggaaaagaagaagaaggagagtattttggacctctcgaaatacattgacaaaacaatc
cgagtgaagttccaaggcgggagagaagcaagtggtgtcttgaaaggatttgaccctctt
ctgaaccttgtgcttgatggtaccattgaatatatgcgagatccagatgatcaatacaaa
ttaacagaggacacacgtcagctgggacttgtggtctgcagaggcacttctgtcgttctt
atttgtccacaggatggaatggaagctattccaaaccctttcattcagcagcaggatggc
tag

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