Chaetura pelagica (chimney swift): 104397351
Help
Entry
104397351 CDS
T08631
Symbol
DHX15
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104397351 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104397351 (DHX15)
03009 Ribosome biogenesis [BR:
cpea03009
]
104397351 (DHX15)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104397351 (DHX15)
Spliceosome [BR:
cpea03041
]
Complex A
U2 snRNP components
U2 related factors
104397351 (DHX15)
Complex B
104397351 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104397351 (DHX15)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
90S particles
Helicases
104397351 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
104397351
NCBI-ProteinID:
XP_010005605
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MEKMVRIVPTLHXNIQVSHFLLCLLTYFRKDRDRDRDRDDRSKDRDRDRDRDRDRDRERD
KEKDLRPTSNSTYYGAAGLQSIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKE
RFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQR
VADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHE
RTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYT
PEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIK
IIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ
KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILR
SNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAE
FPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDH
LTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRD
YYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTK
NYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatggtacgaattgttcccactctgcattaaaatattcaagtatctcatttt
cttctgtgtctcttaacttattttaggaaagatcgtgaccgggacagggaccgtgatgac
cgttctaaagatcgtgacagagatcgtgacagagatagagatcgtgacagagaaagggac
aaggaaaaagatttgcgacccacgtctaactctacttactatggggctgctgggttacag
tctataaaaccggcaatgattccacacagtattaaccctttcacaaatctaccgcataca
ccacgatattacgacatcctgaaaaaaaggcttcagcttcctgtctgggaatataaagaa
agatttacagatattttgattaggcatcagtcatttgtgctggttggagagactgggtct
ggtaaaacaacacagattcctcagtggtgtgttgactacatgcgctcattacccggacca
aagaggggagtagcatgtacccagcctaggagagtagctgcaatgagtgtggcacagagg
gttgctgatgagatggatgtcatgctgggccaggaggttggctactctattcgatttgaa
gactgcagtagtgcaaaaaccattctgaagtatatgactgatggtatgctgcttcgtgaa
gcaatgaatgatcctttgctggagcgctatggtgttatcatccttgatgaggcccatgag
agaacactggctactgatattttgatgggagttttgaaggaagttgtaagacaaagatct
gatttaaaggttatagttatgagtgctactttagatgctggcaagtttcagatctatttt
gataactgtcctcttctaactatcccgggtcgcacccatccggtggagatattctacact
ccagaaccagaaagggactaccttgaggctgccattcggacagtgatccaaattcacatg
tgtgaagaagaggaaggagatctcttactctttcttactggacaggaggagattgatgaa
gcctgcaagaggataaaacgtgaaattgatgatctaggccctgaagttggtgacatcaaa
atcattccattgtattccacccttcctccacagcagcagcaaaggatttttgaacctccc
ccaccaaaaaaacaaaatggagcaataggaagaaaggttgttgtgtccactaatattgcc
gagacatcattaacaatagatggtgttgtgtttgtgattgatcctggttttgcaaaacag
aaggtgtataatccccgtatcagagtggagtctctcttggtgactgcgatcagtaaagct
tctgctcagcagcgagctggccgtgctggtcgtactagaccaggcaaatgcttcaggctg
tacacggagaaggcttacaaaactgaaatgcaggacaacacataccctgaaattttgaga
tctaacttaggatctgtagtattgcagctcaagaaacttggtatagatgatttggtgcac
tttgattttatggatcctccagctcctgaaactctgatgagagccttggagcttttgaat
tatctggctgctttaaacgatgatggagacttgactgagttggggtccatgatggctgaa
tttccgttggacccacaactggctaaaatggttattgcaagttgtgactacaactgttct
aatgaggtcctatctattactgccatgttgtcagtcccacagtgttttgttcgccccacg
gaagcaaagaaagcagcagatgaagccaagatgaggtttgcccatatagatggagatcat
ttgacgttgctgaatgtctaccatgctttcaaacaaaatcatgagtcggttcaatggtgt
tatgacaacttcattaactacaggtccctgatgtctgcagacaatgtacgccaacagctg
tcacgaatcatggatagatttaatttgcctcgaagaagcacagactttaccagccgagac
tattacatcaacataagaaaggcattagttactgggtatttcatgcaggtggcgcatttg
gagcgaacggggcattacttaacagtaaaagataaccaggtggtgcagttgcacccttcc
actgttcttgatcataaaccagaatgggtgctctataatgagtttgtccttacaacaaag
aattacatccggacatgtacagacatcaagccagaatggctggtgaaaattgcccctcaa
tattatgacatgagcaattttccacagtgtgaagcaaagagacagttggatcgcatcatt
gccaaacttcagtccaaggaatactcacagtactga
DBGET
integrated database retrieval system
