Chaetura pelagica (chimney swift): 104397469
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Entry
104397469 CDS
T08631
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cpea
Chaetura pelagica (chimney swift)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
SH3_2
Ank_5
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
104397469
NCBI-ProteinID:
XP_010005733
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSVESESDSSKEETIYDTIRATAEKPSSRMQEGQSNTLVIRI
IIPDLQQTKCIRFNPEASVWVAKQRILCSLNQSLKDVLNYGLFQPASNGRDGKFLDEERL
LREYPQPVNKGVPSLEFRYKRRVYKQFNLDEKQLAKLHTKANLRKFMDYIHHLSVEKITK
MLDRGLDPNYHDLESGETPLTLAVQLDNTVEVIKALKNGGAHLDFRAKDGMTALHKAARA
KNQVTLKTLLELGASPNYKDSCGLTPLYHTAIVGGDPYCCELLLHEHATVSCKDENGWQE
IHQACRYGHVQHLEHLLFYGADMCAQNASGNTALHICALYNQESCARVLLFRGANKEIKN
YNSQSPFQVAIIAGNFELAEYIKNHREADIVPFREAPTYSNKRRRPPSTLAAPRILLRSN
SDNNLNINNLPEWSASSSASSHRSLSPHLLQQMQNNPNGTVKTVGSYTSSSRSRSPSLNR
LGEDVKRQQHRHISAVYSPSANKDALAALDYQGPKRKLYSAVPGRLFIVVKPYQPQGEGE
IHLHKGDRVKVLSIGEGGFWEGSTRGHIGWFPAECVEEVQLKPNESKPETRSDRTKKLFR
HYTVGSYDSFDASSDCIIEEKAVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQY
LESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNLD
PDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKVDEIVPVSKPSRI
ADNATVDSRVATIKQRPSSRCFPSATDMNSMYERQGIAVMTPTVPGSSQGPFLGIPRGTM
RRQKSIGKMLLMYRITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSLPPSPPPPSPS
LYNSPKSPTSRSYGTIKPPFNQNSGAKISLVRPESVGTMIRDKGIYYRRELDRYSLDSED
LYSRSAASQANFRNKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEK
TCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQSSEQPGQLRPDDSLGVSSPFAAAIAGA
VRDREKRLEARRNSPAFLSTDLGDEDVGLTPPTPRMRQSKYTDDAVFISEDGFRQLMSPS
PIPAPREPENLFNSGEPSNQSDSRTLNASSKTKGTENSTVAAKPTNAPSSDNYVHPVTGK
LLDPNSPLALALSARDRAMKEQTQQIPGKGDAVKADLNKPLYIDTKLRSNIETTFPVTAT
VSRQNTRGPLRRQETENKYEADGGKEKKAEEKKNMLINIVDTSQQKSAGLLMVHTVDTAK
SDDTPEDEEEKGAEMEPNPESSQPERPEGGEEAESELSVPAAPEPPASPCKTIVAAGSVD
DPVILPFRIPPPPLASVDIDEEFMFTEPLPPPLEFANSFDIPDDRAAPGSALTDLIKQRK
NGAPSPAPFAPSQPTNSLDSKKQVGLSNCLPASFLPPPDSFDNVTDSGIEEVDSRSSSDH
HLETTSTISTVSSISTLSSEGGENVDTCTVYADGQTFLVDKPPVPPKPKMKPIINKSNAL
YKDALIEEAVDSFVIPPPAPPPPPISAQPNMAKVVPQRTSKLWGDVTEVKSPILSGPKAN
VISELNSILQQMNREKSSKPGEGLESPTGTKTASLSTRSTEVMSTVSGTRSTTITFTVRP
GTSQPITLQSRSPDYDSRTSGARHAPSPVVSPTEINKDIMPAPLSASASASSPSPTLSDV
FSLPSQPPSGDLFGLTTGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLG
EHKETFMDNEIDGTHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtagcccgacttccagtgaagatgaaatggcacaaagcttttctgactattct
gttgaatctgaatcagacagctccaaagaggaaactatttatgacacaattagagcaact
gcagaaaagccaagcagcagaatgcaagagggtcagagcaacacattagtcattcgaatt
atcatccctgacctgcagcaaacgaaatgcattagatttaacccagaagcttcagtgtgg
gttgcaaaacaacgaattttgtgcagtttgaatcagagtttgaaagatgtcctgaattat
ggactattccagcctgcaagcaatggcagagatgggaagtttttggatgaagaacgactt
ctcagggaatacccacagccagtgaataaaggagttccttcactggagtttcgatacaag
agaagagtgtacaaacagttcaacctggatgaaaaacagctggccaagcttcataccaag
gctaatttgagaaaatttatggattatatccaccatctctcagtggaaaaaatcacaaaa
atgttggaccgaggactggacccgaactatcatgacctggaaagtggagaaacaccccta
actttggcagttcagcttgacaatacggtggaagtgataaaagctctgaaaaatggagga
gcacatttagatttcagagccaaagatggaatgacagctctgcacaaagcagccagggcc
aagaaccaagtaaccctcaagacccttttagagcttggagcatctcctaactacaaggac
agctgtggcctgacaccactgtaccacacagctattgtaggaggggatccctactgctgt
gaactgttacttcatgaacatgccacagtcagttgcaaagatgaaaatggatggcaagaa
atccaccaggcttgtcgatatggacacgtccaacatctagagcacctcctcttctacggc
gccgacatgtgtgcgcagaacgcctcgggaaacacagcgctgcacatctgcgccctgtac
aaccaggagagctgtgcaagagtgttgctgttccggggagccaacaaggagattaagaat
tacaacagccagtctccattccaggtggctataatagctggaaattttgagctcgctgaa
tatatcaagaatcacagggaagctgatattgtgccctttagagaggctcccacctactcc
aacaaaaggcggaggcccccgagcaccttggcagcccctcggatcttgctgcgttccaac
agcgacaacaacctcaacatcaacaacctccctgagtggtcagcctcctcctctgcttct
tcacaccgcagcctttcacctcatctgcttcaacagatgcagaataatcctaatggaact
gtaaaaactgtggggagttacacttcgtcctcccggagccggtcgccatccctgaacagg
ctgggagaggatgtcaaacggcagcagcacaggcacatcagtgccgtttacagtcctagt
gccaacaaggatgctctggctgccttggattatcagggtccaaaacgcaagctttacagt
gctgtacctggaagactttttattgttgtgaagccatatcaacctcaaggggaaggggag
attcacctgcacaaaggagacagagtcaaagtgttaagcatcggtgaaggtggattctgg
gaaggcagcacccggggacatattggctggtttcctgcagaatgtgttgaagaagttcag
ttgaaaccaaatgaaagcaaaccagaaacacgatcagatagaacaaagaaactgttcaga
cactacacagttggatcctatgacagctttgatgcttcaagtgactgcataatagaagaa
aaggcagtggtcctgcagaaaaaagacaatgaaggatttggatttgtgctcagaggggca
aaagctgacacaccaattgaagaattcaccccaactccagcctttcctgctttgcagtac
ttggaatcggtggacgaagggggagtagcatggcaagctggcctgagaactggagacttt
ttgatcgaggttaataatgagaatgtagtgaaagttggccacaggcaggtggtgaacatg
attcgacaagggggcaatcacctagttcttaaggttgtcacagtaaccaggaatcttgat
ccagacgacacagctagaaagaaagccccaccacctcctaagcgagctccaaccactgca
ctgaccttgcggtctaagtcaatgacctcagagcttgaagagcttgtggataaagcttca
gtacggaagaagaaggataaggtggatgaaatagtaccagtttccaagccatcaagaatt
gcagacaatgcaactgtggactcacgagtggcaactattaaacagcggccttctagtaga
tgttttccctcagctacagatatgaattccatgtatgagagacagggtattgctgtgatg
acgcccactgtaccggggagttctcaaggtccttttctgggtatacctcggggtacaatg
agaagacaaaaatctataggtaaaatgcttctcatgtatagaataacagaggaagaacgg
cagtttttggctcctcctatgctgaagttcaccagaagtctttcgatgcctgacacctct
gaagacatcccaccaccaccacagtccttacctccttctccgccgccgccgtctccctct
ctgtacaactctcccaaatccccaacatcgaggagctacggaacgattaagcctccgttc
aatcagaattcaggtgcaaaaatttctttggtcaggcctgagagtgtaggaacgatgata
agggacaaggggatctattacagacgagaactggaccgatactccctggactctgaagac
ctgtacagtcggagtgccgcatctcaggcaaatttcaggaataagaggggtcagatgcca
gaaaacccatattctgaggttgggaagattgcaagcaaagcagtttacgtgccagccaag
ccagcaaggcggaaggggatgctggtgaaacagtccaatgttgaagacagcccggaaaag
acctgctctatcccaatcccaacgattattgtgaaggagccgtctaccagcagcagcggg
aaaagcagccaagggagcagcatggaaatcgatccgcagtcctcggagcaacccgggcaa
ctccgacccgatgacagcttgggtgtcagcagcccgtttgcagcagccattgctggggca
gtgagggacagggaaaagaggctggaagcaaggcggaattctccagccttcctttccaca
gacctaggagacgaggatgttggactaacgccgccaacaccacggatgaggcaatccaaa
tacaccgatgatgcagtgtttattagtgaagatggttttaggcagctgatgtctccctct
ccgattcctgcacctagagagcctgaaaacctgtttaacagcggcgagcccagcaatcag
agcgactccaggacactgaatgcttcgtccaaaacgaaaggtactgaaaacagtacagtg
gcagctaagcccacgaatgcacccagctcagataattatgttcaccctgtcacaggaaag
cttttggatccaaactcaccgctagccctcgctctctctgccagggacagagccatgaaa
gaacaaacacagcagattccaggcaaaggagacgctgttaaagctgaccttaataaacca
ctttacattgatacaaagctgagatccaacattgagacgacttttcctgttactgctact
gtttctaggcaaaatactcgtggccctttgagacggcaggagactgagaacaagtatgaa
gcagatggagggaaagaaaagaaagccgaggagaagaaaaacatgttgataaacatagtg
gatacttcgcagcagaagtcagctggcttgctgatggttcatactgtggacacagcaaag
tcagatgacacgcccgaagatgaagaggaaaagggagctgaaatggaacccaaccctgaa
agctcccagccagagaggccagagggaggtgaggaagcagagagcgagctgagtgtgccg
gctgcgcccgagccacctgcatctccctgcaaaaccatcgtagcagccggctcggttgac
gaccctgtcatcctgccgttccgcatccctccgccgcccttagcatccgtggatatcgat
gaagagttcatgtttactgagccacttccaccccccttagagtttgccaacagctttgat
atccccgacgaccgcgcggctcccggttcagctctaacagacttgattaagcaacgaaaa
aacggcgccccttcacccgcgccgtttgcccccagccagccaactaattccttggacagt
aaaaagcaagtgggtctttcaaactgtttgcctgcctcctttctgccaccccctgacagc
tttgacaacgtcactgactctgggattgaggaggtagacagccgaagtagtagtgaccat
cacttagagacaaccagcactatctcaacggtgtccagcatctctaccttatcctcggaa
gggggtgagaacgtggatacttgtacagtctatgcagatgggcaaacatttctggtggac
aaacccccagtacctcctaagccaaaaatgaagcccataatcaacaaaagcaatgcactt
tacaaggacgcgctgattgaagaagctgtggacagctttgttattcctccccctgctccg
cccccccctcccatcagtgctcagcccaacatggctaaggttgttccccaaaggacatct
aagctatggggtgatgtgacggaggtgaaaagcccaattctctcaggcccaaaggctaat
gttattagtgaattgaactcaatactccagcaaatgaacagagagaaatcctcaaagcca
ggggaaggattggagtcacctactggaacaaaaactgcaagtctcagtacaaggagcacg
gaagtcatgagcactgtctcaggtacacgaagtacaacaatcacttttactgtccgacct
ggaaccagccaaccgatcacactgcagagcaggtccccagactatgacagtaggacctca
ggagcaagacatgctccaagccctgtggtttcaccaacagagattaataaagacatcatg
cctgctcctctgagtgcttctgcttcagcttcatctccttcaccgactttgtccgatgta
tttagcctacccagccagcccccttctggggacttatttggcttgaccacagggcgcagc
aggtctccctctccctccatattgcaacagccaatctcaaataagccttttacaactaag
cctgtccacctgtggactaaaccagatgtggcagattggttggaaagtctaaacttaggt
gaacacaaagaaacatttatggacaatgaaatagatggcactcatttaccaaatctacaa
aaggaagatctgatagaccttggagtgactagagttgggcacagaatgaacatagaaaga
gctttgaagcagctgctggacagataa
DBGET
integrated database retrieval system
