Chaetura pelagica (chimney swift): 104397591 Help Entry 104397591         CDS       T08631                                  Symbol NPHP3 Name (RefSeq) nephrocystin-3   KO K19360   nephrocystin-3 Organism cpea  Chaetura pelagica (chimney swift) Brite KEGG Orthology (KO) [BR:cpea00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:cpea03037]     104397591 (NPHP3) Cilium and associated proteins [BR:cpea03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    104397591 (NPHP3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_NPHP3 NPHP3_hel TPR_12 NPHP3 TPR_10 TPR_1 TPR_7 TPR_2 TPR_8 TPR_MalT TPR_16 TPR_17 TPR_19 NPHP3_N TPR_11 AAA_16 NACHT KAP_NTPase AAA_22 14-3-3 DUF2225 AAA_19 AAA_14 T2SSE Viral_helicase1 ARM_TT21_4th Motif Other DBs NCBI-GeneID:  104397591 NCBI-ProteinID:  XP_010005892 LinkDB All DBs Position Unknown AA seq 1242 aa AA seqDB search MRTVQFKHQYESIFNYSQSLNSSEVEKKSDAKMQMKKLRAFIQALQKTYQKILREKESAL EAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRELEAKLQRLQAQGIQVF DPEESDSDDNCTDVTATGAQSEYWNGGALGSEPSMGSMMQLQQSFRGPEFAHSSIDVEGP FANINRDDWDAAVASLLQVTPLFSHSLWSNTVRCFIISTDETQPEVDIFLRNYSPKLQRH CETMGYFFQVVHFSTENERPLKDVRKWEIEKSSLVVLLLHLTLPSCLLEDCEEAFLRNPE EKPRLIYHRKEGGRVSSVSVQQLIEQISYVNKAKMIDHIGDVEKGAYKIYNCMEKIIKQD ILGCETTELEGKDLGSKEESTAPEEEIFGDVLWDAHDEQEQMEAFQQASNSTCELGFEKY FERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNTLILYHFVGRPMSTSS ESALIIKRLTLRLMQHSWLVSPLTLDPAKLLEEFPRWLEKLSARHQGSIIIIIDSIDQIQ QAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNSKDVKSLISAECDSAN VKLTKEQEKKLERHCRSATTCNALYVTLLGKTIACVGNTRNIDETLQQCFQCQDTVSLYR LVLRSIQESLQSDKEKGLLREILCVIGVSHNGVSESELMELYPELSSAVLASLVHSLHKM CLLTYGCGLLKFQHLQAWEMVRLEYMEEGEKVISTYRQKLVEYFTMQLSRDRVTWRSADE LPWLFQQQGDKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGKDKSSMAAEYFDSLKE YEKSCEGEESMICLADLYETLGQFLKDLGLLSQAVAPLQRSLEIRETALDPDHPRVAQSL HQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVARELDALATLYQKQNKYEQAEQ LRKKSFKIRQKAARRKGSLCGFALLRQRALQLEELTLGKDTPDNARTLNELGVLYYLQNN LETAELFLKRSLVMRERVLGPDHPDCAQSLNNLAALYNEKKHYDKAEELYEKALDIRRRA LAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVL YCQMKKQIEALPLYERALKIYEDSFGQMHPRVGETLKNLAVLSYEGGDFEKAAELYKRAM EIKEAETLLIGGKATSRHSSSGDTFSLKSALSPNIFLEHGQR NT seq 3729 nt NT seq  +upstreamnt  +downstreamnt atgagaacagttcagttcaagcaccagtatgaaagtatttttaattactcccagagctta aacagcagtgaagtggagaaaaagtctgatgcgaaaatgcaaatgaagaaactaagagcc tttattcaggcactgcagaaaacttaccagaaaatactgagagagaaggagagcgcgttg gaagctaaataccaagccatggagagagccgcgacttttgagcatgatcgagacaaggtc aagaggcagttcaagatttttagagaaactaaagaaaatgagattcaggacttactgaga gccaaacgagagctagaagcaaaacttcagagactccaggcccaaggaatccaagtattt gatcctgaagagtcggattctgatgataattgtacagatgttacagccactggggcacaa tccgagtactggaatggaggagctttgggaagtgagccatccatgggtagtatgatgcaa cttcagcagtctttcagagggcctgaatttgctcatagctctatagacgttgagggacca tttgcaaatataaacagagatgattgggatgctgctgttgccagtttattgcaagttact cctctgttttctcactctctgtggagtaacacagtaagatgttttattattagtactgat gagactcaaccagaagtggacatcttccttagaaactactcacccaaacttcaaagacac tgtgaaacaatgggctacttctttcaagttgttcatttttcaacagaaaatgaaagacct cttaaggatgtaagaaaatgggaaattgaaaaaagttcattagtcgttttgcttctccat ttaactttgccaagttgtttgttggaagactgtgaagaagccttcttgagaaatccagaa gaaaaaccccggctaatttaccacagaaaggagggtggcagagtcagttcagtctcagtg caacagttaatcgaacaaatttcgtatgtgaacaaagcaaagatgattgatcacattgga gatgtggagaaaggagcatacaaaatctataattgtatggaaaagataattaaacaggat atattggggtgtgaaacaacagaattagaaggcaaggatttgggcagtaaggaggagtct actgctcctgaagaagaaatttttggtgatgtattgtgggatgcacacgatgagcaagaa cagatggaagcttttcagcaggcctctaattcaacatgtgagctgggatttgagaaatat tttgaacgtctaaatgacctagtagcagcaccagcaccaattccacctctgcttgtatca ggaggaccaggctctgggaaatctctccttctgtcaaaatggattcaattgcaacaaaag cattcaccaaatactctgatcctttatcactttgttggaaggcccatgtctactagttca gaatctgcattgataattaaacgcctcactttaaggcttatgcaacactcgtggttagtg tcacctctaacgttggatccagctaaacttctggaagagtttccccgctggctggaaaag ctttctgcacgacaccaaggcagcattattataattattgattctattgaccaaatacag caagctgagaagcatatgaaatggctgatagatccactgccagtgaatgtgagagtgatt gtatcagtgaatgtagaaacgtgtccacaggcttggaggttgtggcccactcttcatctt gatccactgaattccaaagatgttaaatctctcattagtgcagaatgtgactctgcaaat gttaaattgaccaaagagcaggagaagaagcttgagagacattgtcgttcagccacaact tgcaatgctttgtatgtcactcttttgggcaaaaccattgcttgtgttggaaatacaaga aatattgatgaaacccttcaacagtgttttcagtgtcaagacacagtgtcactgtacagg cttgttctgagatcaattcaagaatcattgcagagtgataaagagaaaggccttttgaga gagatcctgtgtgtcattggagttagccacaatggtgtgagtgagtcagagctgatggaa ctttatcctgaactgtcctctgccgtgttagcctcactcgttcacagcctgcacaaaatg tgtttgctgacatatggctgtggtttactgaagttccagcacctccaggcttgggagatg gtgagactagagtatatggaagaaggtgaaaaagttatttctacctataggcaaaaacta gtggagtatttcaccatgcagctaagtcgagaccgagtgacttggagaagtgcagatgaa cttccctggctcttccaacagcagggtgataagcaaaagctacataaatgtcttttgaac ctctttgtatcccaaaacctttacaaaaggggacattttgcagaattgctgagttactgg cagctggttgggaaagataagagctctatggcagctgagtattttgactctctgaaagaa tatgaaaaaagctgtgagggagaggaaagtatgatctgcctggctgatctttatgagacc ctgggacagtttcttaaagacctaggtcttctcagtcaggctgtggctcctctgcagcga tctctggagattcgagagactgcgctggatccagaccacccgagggtggcgcagtcactc caccagctagcaggagtttatgttcagtggaagaagtttggaaatgctgaacagttgtat aaacaggcactggaaatctctgaaaatgcttatggagctgaacatcctcgagtagcccgt gaacttgatgcacttgcaaccttgtaccaaaagcagaacaaatatgaacaagctgaacaa ctgaggaagaagtccttcaagatacgccagaaggcagcaaggcggaaaggcagtctgtgt ggctttgctctcctgcgtcagagagccctgcaactggaagagctcacattaggcaaggat acaccagacaatgctcgaaccctcaatgagcttggagtcctctattacctgcaaaataat cttgagacagcagagcttttcctgaagcgctccttggtaatgagagagagagtcctggga cccgaccacccagactgtgcacagtctttgaacaatctggcagccttgtacaatgagaag aagcactatgacaaggcagaggaactctatgaaaaagctttggacatcaggaggagagca ctggctccagatcatccctccttggcttatactgtgaaacaccttgcagtgctgtacaaa aagatgggaaaacttgacaaggctgttcctctctatgaactagcagttgaaattcgacag aagtcatttggcccaaaacaccctagtgtagcaactgctttggtgaatttggctgtcctt tattgtcagatgaaaaagcagattgaagctttacctctttatgaacgtgctttaaagatt tatgaagacagctttggtcaaatgcatcctcgtgtgggggaaactctgaaaaacttggct gtgctaagctatgaagggggagactttgagaaggcagctgaactttacaagagagctatg gaaataaaagaagcagagactttgttgataggtggaaaagcaacttctcgacactcatcc agtggagatacattcagcttaaaaagtgcattatctccaaacattttcctggaacatgga caaaggtga

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