Chaetura pelagica (chimney swift): 104397592
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Entry
104397592 CDS
T08631
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea00260
Glycine, serine and threonine metabolism
cpea00630
Glyoxylate and dicarboxylate metabolism
cpea00670
One carbon pool by folate
cpea01100
Metabolic pathways
cpea01200
Carbon metabolism
cpea01230
Biosynthesis of amino acids
cpea01240
Biosynthesis of cofactors
cpea04981
Folate transport and metabolism
Module
cpea_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
104397592 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104397592 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104397592 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
104397592 (SHMT2)
Enzymes [BR:
cpea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
104397592 (SHMT2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
104397592
NCBI-ProteinID:
XP_010005897
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MLPSLQLGSQPVSPTSSVQALQRCGGQVAISIQRAQHGTAAAAATRHVPSWTGQESLAES
DPEMWSLVQKEKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVV
DQIELLCEQRALEAFDLDPAHWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHL
THGYMSDIKRISATSIFFESLPYKLDPATGLIDYDQLEVMARLFRPRLIIAGTSAYARLI
DYARMKKVCEEVKAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFY
RKGVRSVDKKTGKETLYDLEDKVNFAVFPSLQGGPHNHAIAAVAVALKQVNSPAFRQYCQ
QVLKNAKAMAQALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTC
PGDKSALTPGGLRLGAPALTSRHFREEDFQKVVAFIDEGIALALDVKSKTSKLQDFKTFL
LQDAETQRRLADLRQRVETFARAFPMPGFSDH
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctcccatctctgcagctagggtcacagcctgtcagtcccacatcttctgtgcaggcc
ctgcagcgatgcggtggccaggtggccatcagcatccagcgggcacagcatggcactgct
gcagcagctgctaccaggcatgtgcctagctggacggggcaggagagtctggccgagagt
gaccccgagatgtggagcctggtccagaaggagaaggatcggcagtgccgggggctggag
ctcattgcctctgagaatttctgtagccgggcagcactggaagccctgggctcctgcctc
aacaacaagtactcggaggggtaccctggcaagagatactatgggggagctgaggtggtg
gaccagatcgaactgctatgtgaacagcgagctctggaggcatttgacctggatcctgcc
cactggggtgtcaacgttcagccctactcaggatccccagccaactttgcagcctacaca
gccctgctgcagccccacgaccgcctgatggggctggatctgcctgatgggggccatctc
acacatgggtacatgtcggacatcaagagaatctcagcaacttccatcttcttcgagtca
ttgccctacaaacttgatccagccacagggctgattgactacgaccagctggaggtgatg
gcacggctcttccgtcctcgtctcatcatcgccggcaccagtgcctatgcccgcctcatc
gactacgctcgcatgaagaaggtgtgcgaggaggtgaaagcgtacctgctggcggacatg
gcgcacatcagcgggctggtggcagcgaaggccattccttcgccctttgagcacgcggac
gttgtcaccagcaccacacacaagaccctgcgtggtgccaggtcagggctgatcttctac
cgcaagggtgtacgctcggtggataagaagacaggcaaggagacactctacgacctggag
gacaaggtcaactttgctgtcttcccctccctgcaagggggacctcacaatcatgccatt
gctgctgtggctgtggccctgaaacaggtcaactcaccagctttccgccagtactgccag
caggtactgaagaatgccaaagccatggcacaggccctgctccagcgtgggtacaccctg
gtttcaggtggcactgacaaccacctggtgctggttgacctgcggcccaagggcatcgac
ggcgcacgggctgagcgggtgctggagctcgtctccatcactgccaacaagaacacttgc
ccaggagacaagagtgcactcacgccaggggggctgcgcttgggtgccccagcactgacc
tcccgccacttccgcgaggaggatttccagaaagtggtggctttcattgacgagggcatt
gcactagccctagatgtcaagagcaaaaccagcaagctccaggactttaagaccttcttg
ctgcaggatgcagagacgcaacgccgcttggctgacctgcgccaacgtgtggagaccttt
gctcgtgccttccccatgcctggcttcagtgaccactga
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