Chaetura pelagica (chimney swift): 104397613
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Entry
104397613 CDS
T08631
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104397613 (TRIM71)
04121 Ubiquitin system [BR:
cpea04121
]
104397613 (TRIM71)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104397613 (TRIM71)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104397613 (TRIM71)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104397613 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
Pannexin_like
FA_synthesis
Motif
Other DBs
NCBI-GeneID:
104397613
NCBI-ProteinID:
XP_010005915
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKVVQS
EVKAVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVXXXXXXXXXXXXXRDRMLAQVQE
LKSVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVA
SFTVIGYDHDGEPRLSGGDMISAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLIS
VMMCNQHIENSPFKVVVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVA
DRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFE
GQFILKFGEKGTKNGQFNYPWDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGAL
WKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVD
QEGRIIVADSRNHRVQIFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGMIVVVDFGNN
RILVF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggacgacatgtgggtcacagctttatctacctccaagatgccctccaggactccagg
actctcaccattcagctcctggcagatgctcagcagggacgacaggctattcaactgagc
attgaacaagcccaggctgtggcagagcaggttgagatgaaagcaaaggtggtacagtct
gaagtcaaagcagtggaaaagattcgtcaagtcaaggctaagtcactctacttgcaagtt
gagaagctacgtcagaacctaaataagctggacaacaccattagtgctgttnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgggaccgcatgctggctcaggtgcaggag
ctgaaaagtgtgagaggccttctccagccgcaggaagacgacaggatcatgttcactccc
cctgaccaggcgctgtacatggccattaaatcgatggggtttgtcagcagtggggctttt
gctcctctgaccaaagccactggggaaggccttaagcgtgcactgcagggcaaggtggcc
tctttcacagtgatagggtatgaccacgatggcgagcctcgcctgtcgggaggtgacatg
atctctgcggtggtgatgggcccggatggaaacctttttggggcagacgtcagcgatcag
cagaacgggacctacctggtcagttaccgcccacagctggagggagagcacctgatatct
gtgatgatgtgcaaccagcacattgagaacagccccttcaaagtcgtggtgaagtccggg
cgcagctacatcggcatcgggctgccggggctgtccttcggcagcgagggggacagcgac
ggcaagctctgccgcccctggggggtcagcgtggacaaggaaggctacatcattgttgct
gaccgcagtaacaaccgcatccaggtgttcaagccgtgcgggaccttccaccacaagttt
ggcacgctgggctcgcggccaggccagttcgatcgcccggctggcgtggcctgcgacgtc
tcgcgcaggatcgtcgtggccgacaaggacaatcatcgcatccagatcttcacgtttgag
gggcagttcatcctgaagttcggggagaaaggaacaaagaacgggcaattcaattaccca
tgggatgtggccgtcaacgcagagggcaagatcctggtctctgacacgaggaaccatcgc
gttcagctgttcgggcccgacggggtgtttcttaacaagtacggcttcgaaggggcgctc
tggaagcactttgattcccccagaggtgtgactttcaatcacgagggccacttggtcgtg
acagacttcaacaaccaccgcctgctggtcatccaccccgactgccagtcggcgcgcttc
ctgggctcggaggggacggggaacgggcagttcctgcgcccgcagggtgtggcggtggat
caggaggggcgcatcatcgtggccgattccaggaaccaccgagtgcagatcttcgagtca
aacgggagcttcttatgcaagttcggcgctcagggaagcggcttcggtcagatggaccgt
ccttcgggtatcgccgtcacccctgacggcatgatcgtcgtggtcgacttcggaaacaat
cgcattctcgtcttctag
DBGET
integrated database retrieval system
