Chaetura pelagica (chimney swift): 104397615
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Entry
104397615 CDS
T08631
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104397615 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104397615 (CNOT10)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104397615 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
DUF6058
TPR_7
TPR_MalT
TPR_17
SCAF11-like_C
RdRP_head
Motif
Other DBs
NCBI-GeneID:
104397615
NCBI-ProteinID:
XP_010005916
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MQGNSLWSLTPRDRNPGEPSNPWQGTAQRPILLATSPNNGGSAELASPGSPKHQHNVLSP
RRGQDQGTEKHEGASTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDYKIT
LNTAVAEFCRSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILYHLR
QYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQGNN
NSKNGKNESGNSANKDSSNQKAESGTLIEVAKSKIHQYKVRAYIQMKSLKACKREIKSVM
NTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLGCIH
FAMGKHNLGIFYFKKALQENDNACAQLGTGSSDLGKKFSGRPMCTLLTNKRYELLYNCGI
QLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGIVQS
IVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPKQEN
GSKTSNQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSAYVA
LALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVS
LGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYDKAR
KCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRKKPV
FQPVHSIQPIQMPAFTTVQRK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtaactcactgtggagtttgactccaagggacaggaatcccggggagccttct
aacccctggcagggcacagcccagaggcccattctccttgccacgtcccctaacaacggg
ggctcagcagagctggcctctccgggctcacccaagcaccagcacaacgtgctgagccca
cgtcgtgggcaagatcaaggtaccgagaaacatgaaggagcgagtacttctgggattact
gatcaggaaaaggaattgtcaagcagtgcgttacaagcttttttggctggaaactatgat
gcctgtttacaacacctaaatacccttcaagacatcaacaaagatgactacaaaataact
ttgaatactgctgttgcagagttctgtagaagtaaccagaccacaacagacaatttgaga
caaacccttaaccagctgaagaaccaggttcactctgctgttgaagagatggatggttta
gatgatgttgaaaatagtatgctgtactacaatcaagctgttattttgtatcatctgcgt
caatatactgaagcaatatcagttggggagaagctctaccagtttatagaaccttttgag
gagaaattcgcccaggctgtgtgcttcttacttgtagacttatacctgctaacttaccaa
gctgaaaaggccttacatctacttgctgttctggaaaaaatgatttcacagggcaacaat
aacagcaagaatggaaaaaatgagtcaggtaatagtgcaaataaagactcctcaaatcaa
aaagctgaaagtggaactttaatagaagttgctaaatctaagatacatcagtataaggtg
agagcctatatccagatgaagtcactgaaagcatgcaagagggagatcaaatctgttatg
aatacagctgggaattcagctccttctctctttcttaaaagtaattttgaatatttgagg
ggcaattatcgtaaagcggtgaagcttctaaacagtgcaaacattgctgaacatccaggc
ttcatgaaaacaggtgaatgcttaaggtgtatgttctggaacaatcttggctgtatccac
tttgcaatgggaaagcacaatttaggaattttttactttaaaaaagctttgcaagaaaat
gataatgcgtgtgcacagctaggaacgggtagctcagatctgggtaaaaaattttcaggg
agacccatgtgcacgctactgactaacaaacggtatgagttactctacaattgtggcatt
cagctcttgcatattgggaggcccttagctgcctttgaatgcctgattgaggcagtccag
gtttatcactcaaaccctcgtctttggctgagaatagcagaatgctgcattgctgccaat
aaggggacatcagaacaagaaactaaaggtcttcccagcaaaaagggaattgtgcaatct
atagtaggtcaaggctaccaccgtaagatagtcctggcatcccagtcaatacagaacgtt
gtttataatgatgggcagtcctcagcaatacctgtagcaagtatggaatttgcagccatt
tgtctacgaaatgccttgctgctactgccagaagatcagcaggagccaaagcaggaaaat
ggatctaaaactagtaatcagctggggggaaatacagaaaacagtgaaagcagtgaagca
tgcagcaataaaagtcatgaaggggataagttcattgcagctccaccttcttcacctttg
aagaaacaggaattagaaaatttaaggtgctcaatacttgcctgtagtgcttacgtggct
ctggctttgggtgataacctcatggcattgaatcacgcagataaacttcttcagcaacca
aagctgtcagggtctcttaaatttcttgggcatttgtatgcagcagaagctctcatctct
ctagacagaatatctgatgccatcactcacttgaaccctgagaacgtcactgatgtttcc
cttgggatctcttccaatgagcaggatcaagggtctgacaaaggagagaatgaagcgatg
gaatcttctggcaagcagaccccccagtgttaccccagttcggtcacatcggcgcgaaca
atgatgttgtttaaccttggaagtgcttactgtctgaggagtgaatatgacaaagctcgc
aagtgtcttcatcaggctgcttcactgatccaccccaaagagatccctccagaggctatt
ctgctggctgtatatcttgaattacaaaacggtaacacacagctggcactgcagatcatc
aagagaaaccagcttctcccttctgtgaagacactctccgacatgcggaagaagccagtg
ttccagccagtccactcaatccagcccatccagatgccagctttcactactgttcaaagg
aagtga
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