Chaetura pelagica (chimney swift): 104397780
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Entry
104397780 CDS
T08631
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea04120
Ubiquitin mediated proteolysis
cpea04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104397780 (SYVN1)
04120 Ubiquitin mediated proteolysis
104397780 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104397780 (SYVN1)
Enzymes [BR:
cpea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104397780 (SYVN1)
Ubiquitin system [BR:
cpea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104397780 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
104397780
NCBI-ProteinID:
XP_010006092
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MLYMAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGKLKAAEMEHLVERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLYLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHTIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDILRASLPAQPPPEPPEQAPPPPQTPQVP
QPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNGAENASSSSGTTSTFPPPWMGMP
WPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQHLEARLQCLQNIHTLLDAAMVQINQY
LTVLATIG
NT seq
1463 nt
NT seq
+upstream
nt +downstream
nt
atgctctacatggcggtggtgatggcagggagcctggccctgaccacggccgtggtggct
catgcctattacctgaagcaccagttctaccccaccgtggtttatctcaccaaatccagc
cccagcatggccgttctctacatccaggcctttgtcctggtgtttctcctggggaaattt
atgggcaaagtgttttttgggaagctgaaggcagcagagatggagcacctagtggagagg
tcatggtacgcggtgaccgagacctgcttggccttcaccgtcttcagggacgacttcagc
ccccgcttcgtcgccctcttcaccctcctcctctacctcaagtgcttccactggttggct
gaagacagggtggactttatggaacgaagccccaacatctcctggctcttccacttcagg
attgtctccctgatgttcctgctgggaatcctggatttcctctttgtcagccatgcctac
cacagcatcctgacccggggggcctctgtccagctggtctttggctttgagtatgccatc
ctgatgaccatggtgctcaccatcttcatcaagtatgtcctgcacaccattgacctgcag
aatgagaacccctgggacagcaaagccgtctacatgctctacactgagctcttcacgggc
ttcatcaaagtcctcctctacatggccttcatgaccatcatgatcaaagtccacaccttc
cccctctttgccatccgccccatgtacttggccatgaggcagttcaagaaggcggtgacc
gacgccatcatgtcgcgccgcgccatccgcaacatgaacaccctctaccccgatgccacc
cctgaggagctccaggccatggacaacgtctgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgcctgccttgcaaccacatcttccacaccagctgcctgaggtcgtggttc
cagcgccagcagacgtgtcccacctgccgcatggacattctccgggcttccctgccagca
cagccacctccagaacccccagaacaagccccaccaccaccccagaccccccaagttccc
cagccccccaattttccccagggaatcctccctcccttcccaccaggaatgtttcccttc
tggccaccagtgggtcccttcccaccagttcccggcgttcaaccacccaacggtgccgaa
aacgcctcttccagctctggcaccacttccaccttcccaccaccatggatgggaatgcca
tggccacccctttttggtttcccacccatgccggtgccaccagctggatttgctgggttg
acagaggaggagcttcgggccatggagggacacgacaggcaacacctggaggcccgactg
cagtgtctgcagaacatccacaccctcctggatgctgccatggtccagatcaaccagtac
ctgacagtcctggccaccatcgg
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