Chaetura pelagica (chimney swift): 104397885 Help Entry 104397885         CDS       T08631                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cpea00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104397885 (COL17A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  104397885 NCBI-ProteinID:  XP_010006198 LinkDB All DBs Position Unknown AA seq 1494 aa AA seqDB search MDSVTKKTRQDGSEVTERQGGSSSGLKASSHTGGSGVEKRSYTHGSSYVTSSGSGRLNSS SSTTSYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPEFPRKESASTFTRG RSQSRESEIRVRLQSASPSGRWTELDDVKRLVKGSRSASCSPTRSPSNTLPIPKKAVVET KMVTESSQSVSGTYDTTILNTALPPYVWSSTLPAGSSLGGYHNSSSLINTMSHSTGSVFG APNNLAPSNHTLNTGLSTSSTVFGVQNNLSPGSSTLTQNATAASTAYGMKNTSQSNTMAS TGVSASAGGTILTSQGDDVLRKDCKFLLLEKENVPAKKETELLVMTKDSGKVFSASTTGL SGGSFAEDTLKKEKQGFSSSCAADTGLKSDANGGLKSMATRDKAAYAEIQNGDAGGAIGS APSWCPCRSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKSRVENLEKINGDLLT INEGKLKQAQDVSRVDFLQGISPSSTFNYENEESVWLMVKNRLNKEKERGYFRGERGEPG EKGDMGMQGPRGERGLPGVPGVPGTQTKTLXXXHQGPEGPKGQKGSMGDPGVEGPMGQRG REGLPGPRGEPGPPGFGEKGDRGVIGEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGLPGL QGFRGEAGLPGAKGEKGAPGAKGDQGEKGSRGMTGEQGSRGMPGPPGEPGAKGPAGQAGR DGQPGEKGEPGLMGMPGARGPPGPSGDVGQPGLTGPQGPPGLPGNPGRAGAKGEPGPPGK VISAEGLSTIALPGPPGPPGPAGPAGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAVIETI KTEVSSLASQMLADVQGRAGPPGPPGPPGESVQGPPGPRGPPGLPGPPGPPGRPGSSSIS TSETLFTGPPGPPGPPGPKGDQGERGPRGLTGEPGEPGLPAFSTHGERITMQGPPGVPGP PGPPGPKGEAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGSGGSSSQEIQQYVNDYL KSDSIRHYLTGAQGPPGPPGPPGIITTADGTNLDYAELAARVLSYMTSSSDRYLSFGSSA STTSVLYQQLLDMLQREEIRQYLIGPQGPPGPPGPGGDGMSLSLDYDELTRRFISYLTSS GMSIGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSPGSSLED VSAYLQSVGYSSLSGVQGPPGPPGPPGPPGFSGTGLLSYADITNSDEFRSELIQYLKSDE VRSYISGPPGPPGPRGPPGPKGDSGLVAGSGLRTSEHLHGGSLGAEGLGTGSSYGSSMSR MSSYSASVGRDGSYDSSLGGEGSFEALLAEGESHRRSTSSSRSYSNSFTGSLDYNELALR VSESLQSQGILQDLMSYAAQGPVGPPGPPGPPGISRVFAAYGNVTEDLMDFFRTYGTIQG PPGEKGERGYPGPKGDPGPMGPPGRQGHRGPKGEKGEKGEQVYVGRRKRRNVGV NT seq 4485 nt NT seq  +upstreamnt  +downstreamnt atggattctgtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacaagga gggagcagcagtgggctcaaagcatcatctcacactggagggagcggagtggaaaagagg tcttacacccatggcagcagctatgtgacttcaagtggaagcggtaggttgaattcatca tcatcaaccaccagctacagacaaacccagtctcccagctctactctcaccaaatcacct ggctcaacatttgaaagaaaaacctatgtcaaccgccatgcaacatatgaagggagctcc agtgccaactcttctcctgagtttcccagaaaagagtctgcatcgaccttcacaagaggg agaagccaaagtcgagagagtgagatacgagtccgactgcagagcgcatctcccagtggc agatggacagagctggatgatgtgaaacgtttagtgaaaggaagtcggtcggccagctgc agccctactcgatcaccgtcaaatacgctcccgataccgaaaaaggcagtggtggagaca aagatggttactgagagctcccaatcagtgtcagggacatatgataccaccatactgaat actgccctccctccatatgtgtggtcctccactctgcctgctgggtcttcccttggtgga taccataacagctcttccttgatcaatactatgtctcactctacaggatcagtttttggt gctccaaataacctggctcccagcaatcatactctgaacacaggcctgagcacttcctct acagtgtttggagttcaaaacaacctttctccaggctcttcaaccctgacccagaatgct actgcggcctccacagcatatggtatgaagaacacttctcagagcaacaccatggcaagc acaggtgtgtctgcctcagcagggggaaccattctgacctcccagggagacgatgttctg cgcaaagactgcaaatttctgctgctggagaaggagaacgtcccagcaaagaaggagaca gagctcttggtcatgacaaaggacagtggcaaagtgtttagtgcctctactactgggctt agtggagggtcctttgcagaagacaccttgaagaaagagaagcagggattttcctcctct tgtgctgcagatactggcctaaaatcagatgcaaatggaggactgaaatccatggcaaca agggacaaagcagcttatgcagaaatacaaaatggtgatgcagggggtgcaattggatca gcaccatcctggtgtccctgtcgttcctgctgtagctggtggaaatggcttctgggtttg cttctggcctggttgcttctccttggattgctttttggactcattgctctggcggaagaa gtgagaaagctgaaatctcgtgtggaaaacctggaaaaaatcaatggtgacctcctgaca attaatgaagggaaattaaaacaagcacaggatgtttcaagagtagactttcttcagggt atttcaccatcctcaaccttcaattatgaaaatgaagagtcagtttggttgatggtaaag aacagactgaacaaggaaaaagaacgaggctacttccgaggggaaagaggagaacctggt gagaaaggtgacatgggaatgcaaggtcccagaggagagcgaggacttcctggtgtccca ggtgttcctggtacacagacaaagactctnnnnnnnnnncaccaaggaccagaaggacca aaaggacagaaaggcagcatgggtgatcctggcgtggaaggtccaatgggacaaagaggt cgagaagggctaccagggcctcgaggggagcctggaccaccaggatttggagaaaaagga gatagaggtgttatcggtgagccaggtcctccagggccacctggtcccccaggttctgct ggccttaaaggtctgatgggttctccaggcccacaaggtccaccaggtcttcctggccta cagggatttagaggagaagcaggtctcccaggtgctaaaggtgagaaaggagcacctgga gccaaaggtgatcagggtgagaagggttctcgtggaatgacaggtgaacaaggctcaaga ggaatgcctggtcctccaggagagccaggggctaaaggacctgcaggacaagctggccgt gatggacagcctggtgaaaaaggtgaaccaggtctgatgggaatgccaggagcccgaggc cctccaggaccctctggagatgtaggacagccaggtctcacaggaccccaaggaccacca ggacttccaggcaacccaggccgagcaggagctaaaggagaacctggacctccaggaaaa gtcataagtgctgagggtttgtcaacgattgctctgccaggcccaccaggtcccccaggc ccagctggccccgctggacctccaggtgttccaggtcctgttggaccagctggtctccct ggacagcaaggtccacgaggtgagaaggggtccccaggtgaagctgtgatagaaactatc aaaacagaagtctcgtcattagcttctcaaatgctggcagatgtacaagggcgagcagga ccaccaggtccccctggaccaccaggtgaatctgtgcagggaccccctggacctcgtggt cccccaggattgccaggacctccaggcccaccggggagacctggatcttcttccatatcc acctcagaaacgttattcacaggcccaccaggtccaccaggcccacctggcccgaaggga gaccaaggtgaacgaggtccacgaggactcacaggagaaccaggtgaacctggcctccca gcattctccacccacggtgagcgaatcaccatgcagggacctccaggagttccaggtcca ccaggcccacctggacccaaaggtgaagcaggtgtcccaggcgctcctggcatcccggga gcatctcgagggggatccagacaaattcagggacccccaggacctcctggccctcccggt cctcctggctcaggtggaagttcatctcaagagattcaacagtatgtcaatgactatctg aaaagtgacagcataaggcattatttgactggtgcccaaggcccgccaggccctcctggc ccacctggaatcatcaccacggcagatgggacaaacttggattatgcggagctggctgcc cgtgtgttgagctatatgacaagctcttcagatcgctatctgtcatttggcagttcagca tcaactacatctgttttgtaccaacaacttttggacatgttgcagagagaagaaattcgt cagtatctaattggacctcagggcccaccaggacctcctggaccagggggagatggcatg tctctatcactggattatgatgagctgaccagacggtttatcagctacttgacaagttct ggtatgagcattgggcttcctgggccacctgggcctccagggacacctggtatatcttac agtgacctgacagcatatctgcgaaactctgaattcagtggtcttgttgggcctcctggt cctgcaggacctccaggacctccaggaatccctggatcacctggcagctctctggaggat gtctctgcctacctacaaagtgtgggatactcctccctctctggagtccagggcccacct ggccctcctggccctccgggaccaccaggcttctcaggaaccggcctcctgtcctatgca gacatcaccaacagtgacgagttcaggagtgagctgatccagtatctgaagagtgatgaa gttcgaagctacatctcagggccacctgggccccctgggccacggggaccaccaggaccc aaaggagatagtggtttggtggctgggtcagggttacggacttcagagcatttgcatgga ggatctcttggagctgaaggactgggcacaggcagctcatatggcagctccatgagcagg atgtcatcttacagtgcctcagtgggcagggatggctcttacgattcctccttgggcggt gaggggtctttcgaagcactgctggcagagggggaatcacacaggagatcaacaagttca agcagatcctacagcaactccttcactggctccctggattacaacgagctggcacttcgt gtgtcagagagcctgcagagccaaggtattctccaggacctgatgtcttatgctgcacag ggaccagtaggtcccccaggccctcctggtccccctggcatcagcagggtttttgcagct tatggcaatgtcaccgaggatctcatggacttctttagaacatacggtaccatccagggg ccacctggtgaaaagggagagaggggttatcctggacccaaaggtgaccctggaccgatg ggcccaccaggacgccaagggcacaggggaccaaagggagagaaaggagagaaaggtgaa caagtgtatgttggcagaagaaaaagaagaaatgttggggtttaa

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