Chaetura pelagica (chimney swift): 104397897
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Entry
104397897 CDS
T08631
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform X1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cpea
Chaetura pelagica (chimney swift)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
104397897
NCBI-ProteinID:
XP_010006214
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSSLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLGSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtctaggaaaagaaaaagactgtaaagagaaggatccaaaagtcccatcg
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacaataaaaagacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaggtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtccctcccggca
gaggtgggctgtcttgtgaacctgatgacactggccctgagtgaaaattcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcacaacaaa
cttcgcgaaatcccttcggtggtgtacaggctgggctccctcgccaccctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgggagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaatctatccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgaactgaacctggagaacaacaacatttct
actttgccagagggtcttttatccagccttgtcaaactgactagtttaacactggccagg
aactgcttccagtcctatcccgtgggtggcccgtcccagttctctacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctccccctggactttgggact
tggactagtatggtagaactgaacttagcgactaatcagctcacaaaaatccctgaggat
gtatctgggcttgcttctcttgaggttcttatcttgtccaacaatctactaaagaaactt
ccccatggaattggaaatctacggaagctccgagagctagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttcccagaggtatcggtcaccttaccaatctgacacaccttggg
cttggagagaaccttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccttttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccactcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
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