KEGG   Chaetura pelagica (chimney swift): 104397994
Entry
104397994         CDS       T08631                                 
Symbol
NEDD1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
cpea  Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpea03036]
    104397994 (NEDD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cpea04812]
    104397994 (NEDD1)
Chromosome and associated proteins [BR:cpea03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     104397994 (NEDD1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     104397994 (NEDD1)
Cytoskeleton proteins [BR:cpea04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     104397994 (NEDD1)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_SPT8 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP KNTC1_N
Other DBs
NCBI-GeneID: 104397994
NCBI-ProteinID: XP_010006337
LinkDB
Position
Unknown
AA seq 665 aa
MQEGIRFASSGDDIKIWDSSSLTVLEQFNPHTPSHPVSSLYWASNNRYLVTASAAGDKIV
ISSCKSKPVPLFEIAEGAKQTCVSLNSSSSCILSGGLDNTVNIWDLKSRKLYRSLKDHKD
EVTCVTYNWNDCYVASGSLSGEIILHSVTTNLSSTPFGYGSRQPIRHLKYSSFKKCLLGS
VSDSGNVTLWDVNNQIPYHNFENTHKAPASEICFSPVNKLLLVTVGLDKRIILYDTSSKK
LLTTIVADFPLTTVDFMPDGTTLAIGCSRGKICQYDLRQLTSPVKTVIAHKGCVKCIRLQ
FSNTFSKSNLTGSSNKPVSKKVEVKAGSNLGGIQNTGIKNIGSQASATVLPHLTLSNENK
GGEILQEKTGLPHSCSLDVIPSKETDHGKSADLTNLDGLGRSSLGDVFSPVREDTVASKG
NEDPQGKRDVLDFQSYSVGLDFLPQLATTLPVKRSPVGSSAQGIQSSPLHALVGSPVKEE
EEHLGTDTKKISLGKQEPKEVLKQLSKSSSSSSESASSSSPSSTTVIKVSNTSERLVKNI
QAHSAYDLPVNGTTSISTKITSPVTAGVASSLSEKIAETIGSSRPNAPLTSIQINFIQNM
IQETMDDFREACHRDIVNLQVEMIKQFHMQLNEMHALLERYSVNESLVAEIERLREENKR
LRTHF
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgcaagagggcatccgtttcgcttcctcgggagatgacattaaaatatgggattcctcc
tctctgactgtgctggagcagttcaacccacatacaccctcacatccagtcagctcatta
tattgggccagcaataatagatacctggtcactgcttctgctgctggtgataaaatagtt
atttcgagctgtaaaagcaaacctgttccactctttgaaatagctgaaggagcaaaacag
acatgtgtgagcctgaattctagttcttcgtgtattttgagtggaggccttgataacact
gttaatatctgggatctgaaatccagaaagctttaccgtagccttaaggatcataaagat
gaagtcacgtgtgttacatacaattggaatgattgctatgttgcttctggatctttaagt
ggtgaaattatcctacacagtgttactaccaatttatcaagtactccctttggttatgga
agccgtcagcctattcgacacctgaaatattcatcctttaagaaatgcttgctgggcagt
gtttctgacagtggaaatgtaactctgtgggatgtaaataaccagataccatatcataat
tttgaaaatactcataaagcaccagcttcagaaatctgcttttctccagtcaataagcta
ctgcttgtaactgtaggtttggataaaagaattattctctatgacacttcaagtaaaaaa
ttactgacaacaatagtagctgattttcctctgacaacagtagacttcatgcctgatggt
accactttggctataggatgttcccggggaaaaatctgccagtatgacttaagacaactg
acatcaccagtgaaaacagttattgctcacaaaggctgtgtgaaatgcatacgtctgcag
ttcagcaacactttttctaagtctaaccttaccggttcttcaaataaacctgtatccaaa
aaagtagaagtcaaagctggtagtaatcttggaggaattcaaaatactggtataaaaaac
attggctctcaagcatcagcaacagttttacctcatctgacattgtcaaatgagaataag
ggaggagagattcttcaggagaaaacaggtttaccccatagttgcagcttggatgtgatt
ccatctaaagaaacagatcatgggaaaagtgctgatttaactaatttggatggtttgggt
cgaagtagtttaggagatgttttttctccagtcagagaagatactgttgcaagtaaaggg
aatgaagatcctcaaggaaaacgagatgttctggattttcagtcctacagtgtgggtttg
gattttctcccacagctcgccactaccttaccagtaaaaagaagtccagtgggcagcagt
gctcaaggcatacagtctagcccgttacatgcacttgtgggatctccagttaaagaagag
gaagaacatctagggactgacaccaagaaaataagtcttggaaaacaagaacctaaagaa
gtcttaaagcagctttcaaaatcaagctcgtcaagttcagaatctgcaagttcaagttct
ccgtcatcaaccactgtaataaaggtttctaacacaagtgagagactagtgaagaatatt
caggcccattctgcatatgatctaccagtaaatggtactacttcaataagtacaaagata
acatcacctgttactgctggagtggccagttcattgtcagaaaaaatagcagaaaccatt
gggagtagcaggccaaatgcacctctgacatccatccaaataaacttcattcagaatatg
atacaagagacaatggatgacttcagagaagcatgtcatcgagatattgtgaatttgcaa
gtggagatgatcaagcagttccatatgcagttgaatgaaatgcacgctctacttgaaagg
tattctgtaaatgaaagcttagtagctgaaatagagagactacgagaagaaaacaaaaga
ctgaggactcacttctga

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