Chaetura pelagica (chimney swift): 104398025
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Entry
104398025 CDS
T08631
Symbol
FGD6
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
104398025 (FGD6)
Domain-containing proteins not elsewhere classified [BR:
cpea04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
104398025 (FGD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
PH_11
RHG20_PH
FYVE_2
PH_9
EF-hand_FSTL1
PH_20
Motif
Other DBs
NCBI-GeneID:
104398025
NCBI-ProteinID:
XP_010006369
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MVWVNLKEHLAHEERLRELGLVSLKKPRLGGISSRYLPEAGVPGREKPALGFGFPFFPTP
PGLRKVCQRLSRVFASGRTCLHRARVELFCELMLTKXLCFPSFLEIKKPPVAPKPKFVVG
HKATPPPVAPKPDVVLSGVIQAARKTKPAIAPKPKVLKSSSIPEVKPPSSTQRSTKSFEE
HRGDSSQTLDHLNYKNEASEGSSDNTAYILPMSSCKFECLHKLGNGENTCKTQIIFEHFE
NLENIKVGEKTALALGNSDSEKLANRNQVVLKASILEEKLKDVLTHGVFPNSSPVRHRCA
NKLDKRNGSSSKNDVKIEFMELVHSSSSSEVAKGKQQSTDRKLAADEFQVSEICPTLAEN
NHSCFCSLDQEIPENENLSSNNTFSGEMGMKADADKTSSEASSVLSSEVLPVPKPRKPRA
ACLVRQDGIDTTTEGTKESSNSERDSSRPVEQSFKKPAKINILVQSVCYNNNTEMLNPGK
CEITQRNADKMHQVKEPAVEASTSQSLLPQLSHKMSDSVESVECSSDADCHLVNSIDEVT
DDASMLDAVDKRTNFVRCDTLSMSLPKQLKLTGSQHLPASSIVHVSSQKLEEVKIKNENS
PRIVPKKPQRHSLPAAGVLKKAASAELVEKSSYTSNEDKLNSVLEGSHFTRPPAKEQGTL
SSCDIPRRSSEKPVWKLPHPILPFSGNSESLKNANIATSFNHLTVVTKPRAKSLSAVDME
RTDKPCKDHQKKNSLKKFLNMKLSVCLMKSDFQKFLSKGSQSMDSAIANLTPRDGYGSGS
SRNIASVGSERKAKSAKAHSVEIRSPVLQKKRQRNRSQPEMRSNQRLESLDGNVLLGENL
PQMLLNSVSSACAPEYENVRYYEEIPEYENLPFAMGAKRNLLFGCPNSSSVEEQTSGFYE
VEEPCEATRRSLRLGRSLEEHHDHPNVVMGDLQSDEEDIMNSSDEDDDTNSDSSKGEPDP
QDDKQAAGKKTKVYHIAKEIMSSEKVFVDVLKLLHIDFRDAVAHASRQLGKPVIEDRILN
QILYYLPQLYELNRDLLRELEERLSHWLEHQRIADIFVKKGPYLKMYSTYIKEFDKNVAL
LDEQCKKNAGFASVVKDFEMSPRCANLALKHYLLKPVQRIPQYRLLLTDYLKNLLEESAD
YRDTQDALAVVIEVANHANDIMKQGDNFQKLMQIQYSLNGHHEIVQPGRVFLKEGTLMKL
SRKVMQPRMFFLFNDALLYTTPVQSGMYKLNNMLSLAGMKVKKPTQEAYQNELNIESVER
SFILSASSATERDEWLEAISKSIEEYTKKRITFNPSKSLEEADPEKQEEDSPLGSKAPIW
IPDTRATMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKHGLDYMKNQPARVCDHCFRE
LQKQDNQCTPKSGSPVNHKSPSSALSTVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGY
LHRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVSEVKDENSESRVFHL
LHKNTLFYIFKADDPHSAQKWIEAFQEGTIL
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggtgaacctgaaggaacatctcgcacatgaggaaaggctaagagagctcgga
ctcgtcagcttgaagaaaccaaggcttggagggatctcatcaagatatctgcctgaagcc
ggggttcccggcagggaaaagccagcgctggggtttgggttcccgttcttcccgactccg
ccggggctgcggaaagtttgtcagcgcctgagccgcgtctttgcttcggggcgtacctgc
ctgcatcgagctcgggtggagttgttttgtgagctgatgttgactaaangtctttgtttt
ccatccttcctagaaattaagaagccaccagtggcccccaaaccaaaatttgtggtagga
cacaaggcgacacctccacctgttgcaccaaaacctgatgttgtactttctggtgttata
caagcagcaaggaaaaccaagccagcaattgcaccaaaaccaaaagttctcaagagctca
tccattccggaagttaaacctccatcatctacacaaagaagcacaaaaagctttgaggag
cataggggagattcttctcaaacgcttgaccacttgaactataaaaatgaagcctcggaa
gggagttctgataatacagcatatattctgccaatgtcatcttgcaaatttgaatgcctt
cataagctcggaaatggggagaacacttgtaaaactcagataatttttgagcactttgaa
aacttagagaacatcaaagttggtgaaaaaactgcactagctctgggtaatagtgacagt
gaaaaactggcaaatagaaatcaggtggttttgaaagccagcattttggaagaaaaactt
aaggatgttctaactcatggtgtatttcctaacagcagtcctgtgaggcacaggtgtgca
aacaaacttgataaaagaaatggcagcagttccaagaatgacgttaaaatagagtttatg
gaacttgtgcactcttcatcatcttctgaggtagctaaagggaagcagcaaagtacagac
agaaagctcgctgctgatgagtttcaggtgtctgaaatttgtcctactttggctgaaaat
aaccacagttgtttctgctcattggaccaggaaatcccggaaaatgaaaatttaagtagc
aataatacattttcaggtgaaatgggtatgaaagcagatgctgataaaacctcctccgaa
gcatcttctgtcctgagctcagaagtgcttcctgtccctaagccaaggaagccacgtgct
gcatgtcttgtccgtcaggatggcatagacaccacaacagaaggaacaaaggaatcatct
aattcagagagagattcctctaggcctgtggaacaaagctttaaaaagccagcaaaaatt
aatattcttgttcaaagcgtttgttataacaataatacagaaatgcttaatcctggaaaa
tgtgagataactcaaagaaatgcagacaaaatgcatcaggtgaaggaacctgctgtggaa
gcgtcaacgtcacaaagtcttttgcctcagttgtcacacaagatgtctgattcagtggaa
agtgttgaatgttcttcagatgcagactgtcacttagttaactctatcgatgaggtgaca
gatgatgccagtatgctagatgctgtggacaaaaggactaactttgttagatgtgatact
ttgtccatgagtttgccaaagcaactcaaattaactggcagtcagcacttgcctgcttcc
agtatcgtccatgtttcctcacaaaaattggaagaagttaaaataaagaatgaaaattct
ccaagaattgttcctaagaagccacagaggcatagcctaccagctgctggtgtgctgaaa
aaagctgcatcagcagagcttgtggagaagagttcttatacctccaacgaggacaaattg
aacagtgttctggaagggtctcacttcacgcgtccgccagcaaaggagcaaggcacactg
tcatcctgtgacatacccagacgttcttctgagaaacctgtctggaagttacctcatcca
attcttccattttcaggaaattcagaatcattaaaaaacgctaacatagcaaccagcttc
aaccacttgactgttgtgacaaagccgagggccaaatctctctctgctgtagacatggaa
aggacagacaagccttgcaaagaccatcagaagaaaaacagcttgaaaaagtttctcaac
atgaaactgtctgtttgcttaatgaaaagtgacttccaaaaatttctgtctaaaggcagc
caatcaatggatagtgctattgccaaccttacccccagggatgggtatggaagtggtagc
agccggaatatagcatctgtaggcagtgaaaggaaggctaaatctgccaaggcacattct
gtggaaataagaagtccagtgttacagaagaagaggcagagaaacagaagtcaacctgag
atgcgaagtaaccaaaggctggagtctttagatgggaatgtactgttgggagagaactta
ccacaaatgcttctgaattctgtatccagtgcttgtgctccggagtatgagaacgtgcgt
tactatgaggaaatacctgaatatgagaacttgccttttgcaatgggtgctaagagaaat
ctcctctttggatgtccaaactccagcagtgtggaagagcagacctctggtttctatgag
gttgaagagccttgtgaagccacaagaaggagtttgagacttggcaggtccttagaagaa
caccatgatcatcctaatgtggtaatgggagatcttcagtcagatgaagaagatatcatg
aacagttctgatgaagatgatgacacaaattctgattccagcaaaggggaacctgatcct
caagatgataaacaggcagctggaaagaaaacaaaggtttaccacattgccaaggagatc
atgagctcagagaaagtgtttgtggatgtgttaaagctcttacacattgatttccgggat
gctgtggcacatgcctccaggcagcttggaaagcccgtgattgaggacagaatcctgaat
cagatcctgtactacctacctcagctgtacgagctcaatcgggacctcctgagggaactg
gaagagcgattatctcactggcttgaacatcaaagaattgcagatatatttgttaaaaag
ggtccatacttgaagatgtattcaacttacataaaagaattcgataaaaatgttgcacta
ttagatgaacagtgtaagaagaatgcaggttttgcttcagttgtcaaagactttgagatg
agcccccgctgtgctaatctggccctcaagcactatctgctcaagccagttcagaggatt
ccccagtacaggctcctgttgacagattatttaaagaatcttttagaagaatctgcagac
tatagggatacccaagatgctctagctgttgtcatagaagttgcaaaccatgccaatgac
atcatgaagcagggagataactttcagaaactcatgcagatccagtacagcttaaatgga
caccatgaaattgtacagccaggaagggtctttctgaaagagggaacactcatgaagctg
tcccggaaggtcatgcagccacggatgttttttctgttcaatgatgccctgttgtatact
actccagttcagtcagggatgtataaactcaacaacatgctatcgttggctggaatgaag
gttaagaagccaacccaggaagcatatcagaatgaactgaacattgaaagtgtagaaaga
tccttcattctttcagcaagttcggctacagaaagagatgagtggttagaagctatctcc
aagtcaattgaagaatatacaaaaaaaagaatcacatttaatcctagcaaaagtcttgaa
gaggcggatccagagaaacaggaagaagacagtccactgggatcaaaggctcccatctgg
atccctgacactagagccacgatgtgtatgatctgcacaagtgaattcacactgacgtgg
agaaggcatcactgcagggcatgtggaaagattgtctgtcaagcttgctcatcaaataaa
catggtttagactacatgaaaaaccagccagcaagagtatgtgatcattgcttcagggaa
ctacagaaacaagataaccagtgcactcctaagagcggatccccagtcaaccataaatct
ccatcaagtgccttgtctacagtattacatagtattccctctggaagaaagcagaaaaaa
attcctgcagccctcaaagaagtttcagcaaatacagaagactctacaatgagtggctac
ctacatagatctaagggcagtaagaagccatggaaacacctatggtttgttataaaaaat
aaggtgctatacacatatgctgccagtgaggatgttgcagcattagagagccagccttta
ctgggattcacagtcagtgaagtaaaagatgaaaattcagagtcaagagtgttccattta
ctgcacaaaaacactttattttacatattcaaagcagatgatccccattcagctcaaaag
tggatagaagcttttcaagaaggcaccatattatag
DBGET
integrated database retrieval system
