Chaetura pelagica (chimney swift): 104398162
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Entry
104398162 CDS
T08631
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03018
RNA degradation
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104398162 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
104398162 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104398162 (LSM4)
03041 Spliceosome [BR:
cpea03041
]
104398162 (LSM4)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104398162 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
104398162 (LSM4)
Spliceosome [BR:
cpea03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104398162 (LSM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104398162
NCBI-ProteinID:
XP_010006515
LinkDB
All DBs
Position
Unknown
AA seq
127 aa
AA seq
DB search
MGWSLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRI
PDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGIGGAGRGVFGGRGRGIPGSGRGQQEKKP
GRQAAKQ
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggggtggtcactggtggagctgaaaaacggggaaacgtacaacgggcacctggtgagc
tgtgataactggatgaacatcaacctgcgggaagtcatctgcacctcccgggatggagac
aagttctggaggatgcctgagtgttacatccgtggcagcaccatcaaatacctgaggatt
cctgacgagatcatcgacatggtgaaggaagaggtggtgtccaagggcagaggccgtggt
gggatgcagcagcagaagcaacagaagggtcgtgggattggaggtgctggaagaggtgtc
tttggtggccgcggcagaggaatcccaggcagtggaagaggccagcaggaaaaaaagcca
ggcagacaagcagcaaaacagtga
DBGET
integrated database retrieval system
