Chaetura pelagica (chimney swift): 104398232
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Entry
104398232 CDS
T08631
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpea04515
]
104398232
Cell adhesion molecules [BR:
cpea04515
]
Cadherins
Protocadherins
104398232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
104398232
NCBI-ProteinID:
XP_010006588
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
LFSLLFLLLAGSPAPRPAGGQLRYAVPEELEHGAFVANLGEDLGXDVSTLSARRFRIVSR
AGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLELYRVEVEVLDIND
HAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPNSFFSLEVQTRSDS
SKFAELVLERALDREQQRAHRVLLTALDGGVPARSGTAHILVTVLDANDNVPAFDQPSYG
VSLPEDAPPGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFHIEPRSGQVLLKGSL
DYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVLEDAPPGTV
IAVISVLDRDSGDNGRVSCEVSPDVPFELHSSFRNYYTLVTTQALDREAVPEYNVSITAR
DMGSPALLTHSTLTVPVSDVNDNAPRFLQPSYSVYVMENNAPGASICSVSASDPDCQQNA
YLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQVQAQDAGFPPLSAN
VTVHIFVLDQNDNAPVIVSPTPRNGSVATELVPRSARPGYLVGTVSAVDADAGLNSRLSY
QLLQATDFTLFSVGPDTGELRTLRSFLEQDATRQQLVVQVRDGGQPALSASVSLLLSVVE
TMPQTLSDFSEFSLPPEASSSSPLTLYLLVSLGSISFTFLLAILILTAIRCRGARRSRQE
DGCSAPRCHCCPGPRPSSDGLKTSNLTAQPPAGTAAATCLDVPGGGPPGYCYKVCLGPES
AQSDFMFLKPCSPPRNNEKDPGKRSQPGQHLQVSKQVKQPNTDWLPPSTQRPVLKSSQSL
EDMGEIRRALQKEHERLRTLVTPVSEFQKTSAGTNSIWTPQYSSLYPGYIPALDYQHNVY
IPGTPTLLSGKDGPLFLGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
ctcttctccctcctcttcctcctgctggccgggtccccggccccgcgcccggcgggcggg
cagctgcgctacgcggtgccggaggagctggagcacggagccttcgtggccaacctgggc
gaggacctggggngggacgtatcgactctgtcggctcgacggttccgcatcgtgtcgcgg
gccggggccaggcagcacctggaggtgaacctggagaacgggatcctcttcgtgaacgag
cgcatcgaccgggaggaggtgtgcgaggccggggggacctgcctgctccacctgcagctc
cttgtggagagcccgctggagctctaccgtgtggaggtggaggtgctggacatcaacgac
cacgcgcccaccttcccctggcaagagtacgtgctggaggtggccgagtccgcggtgctg
ggtgcccgcttccctctggagagcgctcaggatcccgacgtgggcaccaactcggtgcac
acctaccggctcagccccaacagcttcttctccctcgaggtgcagacacgcagtgactcc
agcaagtttgcagagctggttctggagcgcgccctggaccgcgagcagcagcgggcgcac
cgggtgctgctcaccgccctggacgggggtgtccccgcgcgctcggggacagctcacatc
cttgtcaccgtgctggacgccaacgacaacgtgccggccttcgaccagccctcgtacggc
gtcagccttcctgaggatgcccctcccggcaccctggtcatccagctcaatgccaccgac
ctggatgaaggccccaacggggagatcgagtactccttcagcgggcacgcgcccccgcgc
gtccgggagctcttccacatagagccccggagtgggcaggtgctgctgaagggctctctg
gactatgagcgggcaagtctccacgagctctacgtgcaagccaaggaccgcgggccctcg
gctgtggccgtgcactgccgggtgcttgtgcatctccttgatgtgaatgacaacgcgccg
gaggtgaccctcacctctgtatctactcctgtgctggaggatgccccaccaggcactgtc
atcgctgtcatcagtgttctggaccgggactctggggacaatgggcgggtgagctgcgag
gtcagccctgatgtaccctttgagctccactcctccttccgcaactactacacgctggtg
accacgcaggcactggaccgggaggccgtgcccgagtacaacgtcagcatcacagcacgg
gacatgggctcccctgccctgctgacccacagcaccctcactgtgcccgtgtccgatgtc
aacgacaatgccccgcgcttcctccagccctcctacagcgtctacgtgatggagaacaac
gcgccaggtgcctccatctgctctgtcagcgcctcggaccccgactgccaacaaaacgcc
tacctgtcctactccatcgctgacgggcacatccatggcatgcccgtgggcacctacgtg
tccatcaactcggacagcgggcacatgtacgccctgcgctccctcgattacgagcagatc
cgcagcttccagatccaggtgcaagcacaggacgctggtttcccccccctcagcgccaat
gtcaccgtccacatcttcgtgctggaccagaacgacaacgccccggtcatcgtttccccc
acgcctcgcaacggctccgtggccaccgagctggtgccgcgatcagccaggcctggctac
ctcgtgggcacggtgtcggcggtggatgcggacgcggggctgaactcccgcctctcctac
cagctcctccaggccaccgacttcaccctcttcagcgtgggaccagacacgggggagctg
cgcaccctccgctccttcctggagcaggacgcgacccggcagcagctggtggtgcaggtg
cgggatggagggcaaccagccctctctgcctctgtctccctcctgctttccgtggtggag
accatgcctcagactctctctgacttcagcgagttcagcctccccccagaggcctcttca
tcctccccactcaccctctacctccttgtctccctgggctccatctccttcaccttcctc
ctcgccatcctcatcctcacagccattcggtgccgcggagcgcggcgctcccgccaggag
gacggctgctcagcgccgcgctgccactgctgccccggccccagaccctcctctgacggc
ctgaagacgtccaacctgacagcgcagccccctgcgggcaccgcggctgccacctgcctc
gacgtgccagggggtggccccccaggctactgctacaaggtctgccttggtcctgagtct
gcccagagcgacttcatgttcctcaaaccctgcagccccccccggaataacgagaaggac
cccgggaagcggtcccagcctggccagcatcttcaggtctccaagcaggtcaagcagccc
aacacggactggctgcctcccagcacacagagacctgtcctgaagagctcccagagcctg
gaggacatgggggaaatccgcagagccctgcagaaggagcacgagaggctgcgcacgctg
gtgacccctgtatcagagtttcagaagacttctgcaggcaccaacagcatctggaccccc
cagtacagctccttgtacccgggctacatcccagcccttgattaccagcacaacgtctac
atccccggcacccccactctgctctcgggcaaggacgggcccctcttcctgggccgggag
aacaagaacagcttctccacctttggcaagaggaagaagatgacaacttactgtgacatg
catgacagtgtggttatcaacaacgacctgaaataa
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