KEGG   Chaetura pelagica (chimney swift): 104398295
Entry
104398295         CDS       T08631                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cpea  Chaetura pelagica (chimney swift)
Pathway
cpea03082  ATP-dependent chromatin remodeling
cpea03083  Polycomb repressive complex
cpea04110  Cell cycle
cpea04330  Notch signaling pathway
cpea04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cpea00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104398295 (HDAC2)
   03083 Polycomb repressive complex
    104398295 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    104398295 (HDAC2)
   04350 TGF-beta signaling pathway
    104398295 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104398295 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpea03036]
    104398295 (HDAC2)
Enzymes [BR:cpea01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104398295 (HDAC2)
Chromosome and associated proteins [BR:cpea03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104398295 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     104398295 (HDAC2)
    BRAF-HDAC complex
     104398295 (HDAC2)
    REST complex
     104398295 (HDAC2)
    SHIP complex
     104398295 (HDAC2)
    MiDAC complex
     104398295 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104398295 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104398295 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    104398295 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104398295
NCBI-ProteinID: XP_010006689
LinkDB
Position
Unknown
AA seq 458 aa
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGD
RLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDAV
HEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRNVADHKKGAKKARIEED
KKETEDKKPDVKEEDKSKDSSGEKTDAKGAKSEQLSNP
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgaaacctcacaggatccgaatgacgcacaacttgctgctcaattatggcttgtacaga
aaaatggagatttatcgacctcacaaagctactgctgaggaaatgaccaagtaccacagc
gatgaatacatcaagtttctccgctccataaggcctgacaatatgtctgagtacagcaag
caaatgcagagattcaatgttggagaagactgtcctgtatttgatggcctgtttgagttt
tgtcagctgtcaactggagggtctgttgccggggcagtaaaattgaacaggcagcaaaca
gacatggctgttaattgggctggaggacttcaccatgccaagaaatccgaggcatctggc
ttctgttacgtcaatgacattgtgcttgccatccttgagttactgaagtatcaccaaaga
gtgttgtatattgatattgatatccatcatggtgatggtgttgaagaagcattttatact
acagatcgtgtcatgacagtatcattccataagtatggtgaatattttccgggcacaggg
gaccttagggacattggtgctggaaaaggcaaatactatgctgtcaactttccaatgagg
gatgggatagatgatgaatcttatggacagatattcaaaccaattatatccaaagtaatg
gagatgtaccagcctagtgctgtggtgctacagtgtggagcagattcactgtcgggggac
aggctgggatgctttaatctgactgttaaaggtcatgctaaatgtgtggaagttgtcaag
actttcaacttgccactgctgatgttgggaggaggaggatacactattcgaaatgttgct
cgatgctggacgtatgaaactgctgttgccttagattgtgaaattcctaatgagttgcca
tacaatgactactttgagtattttggaccagacttcaagcttcacattagtccttcgaat
atgactaatcagaatactccagagtacatggagaagatcaagcagcgcttgtttgagaac
ctgcgcatgttgcctcacgcgcccggcgtgcagatgcaggccatccctgaggatgctgtg
catgaagacagtggggatgaggatggagaagatccagacaaacgcatctctatccgagcc
tctgacaagcgcatcgcctgcgatgaggagttctcagattcagaagatgaaggggaagga
gggcggcgaaatgttgcagatcataagaaaggagcaaagaaagccaggatagaggaggac
aagaaagagactgaggacaaaaaaccagatgttaaggaggaggataaatccaaggacagc
agtggtgaaaagacagatgccaaaggagcaaaatcagaacagctcagcaatccttga

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