Chaetura pelagica (chimney swift): 104398304
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Entry
104398304 CDS
T08631
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104398304 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104398304 (XRCC4)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104398304 (XRCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
ParD_antitoxin
Leu_zip
TSCPD
UPF0242
Motif
Other DBs
NCBI-GeneID:
104398304
NCBI-ProteinID:
XP_010006700
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MEKTLNRIHPVSDPEATYFLQVSWEKDLGTGFGIMLSDAQCAWTGTVSEAEISREAADME
MNREKYVEELKKALIAGEESAGKYNFAISRDEGNMECLFSYERNLKDGSFRLGSLKLQKV
SSPAEVVKDLIGYCLDCMGRLQAKNEHLQKENERLLSDWSDVEKRLEKCVEAKEELEVDL
YSRFCLVLNEKKAKIRNLQKLLNEAKESSADAKCTRDSVTTTQMATGRENDYDGSTEEES
ENLTQASLPSAPERRDSLLVSPDVLDTAPRRKRRQRTTKAARTGAKVAAYETELPAKEKP
DVASQKTSGKQSLDVMSLETLENTCEPEDLFGDI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaactttgaacagaattcatccagtttctgatccagaagcaacctattttcta
caagtgtcatgggaaaaagatttaggcactggctttggtataatgctgagtgatgctcaa
tgtgcatggactgggacagtgtctgaagctgaaatttctagggaggctgctgacatggaa
atgaatagagagaagtatgttgaagaactgaagaaagcgttgatagcaggagaagaatca
gctggcaaatataactttgctatttcgagagatgaaggaaatatggagtgtctcttctca
tatgaaagaaatctgaaagatggctcttttagacttggatctctgaagctacagaaagtt
tccagtccagcagaggtggttaaggacctgattggttattgtctggactgcatgggaaga
ctgcaggcaaaaaatgaacatctgcaaaaagagaatgaaaggcttttgagtgactggagt
gatgtggagaagcggctggaaaaatgtgtggaagctaaagaagaactagaggtagatctt
tatagccgattttgtttggtgctgaatgaaaagaaggcaaagataagaaacttacagaag
ttgctgaatgaagctaaggaatcttcagcagatgccaaatgtacaagggatagtgtaact
accactcagatggctacagggagagaaaatgactatgatggtagcactgaggaggaaagt
gaaaatttaacacaagcctcgttaccatcagcaccagaacgaagggattccctcctggtt
agcccagatgttcttgatactgctccaaggagaaagcgaagacaaaggacaacaaaggct
gccaggacaggagctaaggtggctgcttatgagacagaactgccagccaaggaaaaacct
gatgtagcctcacagaagacatcaggcaagcagtcgctggatgtgatgtctcttgaaaca
ttggaaaacacttgtgagccagaggacctctttggtgacatctag
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