Chaetura pelagica (chimney swift): 104398355
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Entry
104398355 CDS
T08631
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03013
Nucleocytoplasmic transport
cpea03015
mRNA surveillance pathway
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104398355 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
104398355 (EIF4A3)
03015 mRNA surveillance pathway
104398355 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpea03019
]
104398355 (EIF4A3)
03041 Spliceosome [BR:
cpea03041
]
104398355 (EIF4A3)
03009 Ribosome biogenesis [BR:
cpea03009
]
104398355 (EIF4A3)
03012 Translation factors [BR:
cpea03012
]
104398355 (EIF4A3)
Enzymes [BR:
cpea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104398355 (EIF4A3)
Messenger RNA biogenesis [BR:
cpea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104398355 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
104398355 (EIF4A3)
Spliceosome [BR:
cpea03041
]
Complex C
Other components
EJC/TREX
104398355 (EIF4A3)
Ribosome biogenesis [BR:
cpea03009
]
Eukaryotic type
90S particles
Helicases
104398355 (EIF4A3)
Translation factors [BR:
cpea03012
]
Eukaryotic type
Initiation factors
eIF-4
104398355 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
104398355
NCBI-ProteinID:
XP_010006766
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MKEEDMTKVEFETSEEVDVTPTFDTVGLREDLLRGIYAYGFEKPSAIQQRAIRQIIKGRD
VIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQC
HACIGGTSVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGF
KEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVA
VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERE
SIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVA
INFVKNDNIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggaggacatgaccaaggtggagttcgagacgagcgaggaggtggacgtgacg
cccaccttcgacaccgtggggctgcgggaggacctgctgcgcggcatctacgcctacggt
tttgagaagccgtcggccatccagcagagagccatcaggcagatcatcaaggggagagac
gtgatcgcccagtcacaatcaggaacagggaagacagcaacattctccatatcagttctg
cagtgcctggatatacaggttcgtgagacccaggcgctgatcttggcaccgactcgggag
ctggctgtacagattcagaagggtctcctcgctctgggcgactacatgaatgtccagtgt
cacgcctgcatcggggggaccagcgtgggtgaagatatccggaaactggattatgggcag
catgttgttgctggcaccccaggccgtgtgtttgatatgattcgtcgtcgaagtttaagg
actcgtgcgatcaaaatgctggttttggatgaagcagatgaaatgctcaataaaggtttt
aaggagcagatctatgatgtgtacagatacttgcctccagctacacaggtggttctgatc
agtgccactttgcctcatgaaattctggaaatgaccaacaaattcatgacagaccccatt
cgcatcttggttaaacgtgatgagttgaccctcgaaggcatcaagcagtttttcgtggct
gtggagagggaagagtggaagtttgacaccttgtgcgatctctacgacacactcacaatc
acccaggctgtcatcttctgtaacaccaagagaaaggtagactggctcacagagaagatg
agagaagccaacttcaccgtttcatccatgcatggggacatgccacagaaggagagagag
tccattatgaaagagttcagatctggtgcaagccgagtccttatttcaacagatgtttgg
gctagaggcctggatgtgcctcaggtgtccctgatcattaactacgacttgcccaacaac
agagaactctacatacacagaattggccggtcaggcagatacggccgaaaaggggtagcg
atcaactttgtgaagaacgataacatccgcatcctgcgggacattgagcagtactactcc
acccagatcgatgagatgcccatgaatgttgctgatctcatctga
DBGET
integrated database retrieval system
